DRSC/TRiP Functional Genomics Resources

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Protein Alignment Klp3A and kif1ab

DIOPT Version :10

Sequence 1:NP_525053.1 Gene:Klp3A / 31240 FlyBaseID:FBgn0011606 Length:1212 Species:Drosophila melanogaster
Sequence 2:XP_009296795.1 Gene:kif1ab / 566766 ZFINID:ZDB-GENE-070912-480 Length:1799 Species:Danio rerio


Alignment Length:1131 Identity:285/1131 - (25%)
Similarity:442/1131 - (39%) Gaps:300/1131 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VAVALRVRPLVQSELDRGCRIAVERSADGAPQVTVN-----RNESYTYNYVF-------DIDDS- 60
            |.||:||||....|:.:..:..::.|  |.....:|     .|:|:.::|.:       |::.: 
Zfish     6 VKVAVRVRPFNSREIGKDSKCIIQMS--GNTTTILNPKQPKENKSFNFDYSYWSHTTPEDVNYAC 68

  Fly    61 QKDLFETCVQAKVKKLLNGYNVTILAYGQTGSGKTYTMGTAFNGVLDDHVGVIPRAVHDIFTAIA 125
            ||.::....:..:.....||||.|.||||||:||:|||   ......|..|:||....|:||.|.
Zfish    69 QKQVYRDIGEEMLLHAFEGYNVCIFAYGQTGAGKSYTM---MGKQEKDQEGIIPLLCEDLFTKIN 130

  Fly   126 E-MQSEFRFAVTCSFVELYQEQFYDLFSSKTRDKATVDIREVKNRIIMP---GLTELVVTSAQQV 186
            : ..:...::|..|::|:|.|:..||.:.|  :|..:.:||  :.::.|   .|::|.|||...:
Zfish   131 DNNDNNMSYSVEVSYMEIYCERVRDLLNPK--NKGNLRVRE--HPLMGPYVEDLSKLAVTSYNDI 191

  Fly   187 TDHLIRGSAGRAVAATAMNETSSRSHAIFTLTLVATKLDGKQSVTT---SRFNLVDLAGSERCSK 248
            .|.:..|:..|.||||.||||||||||:|.:.....:.|.....||   |:.:|||||||||...
Zfish   192 QDLMDSGNKARTVAATNMNETSSRSHAVFNIIFTQKQHDNDSENTTEKVSKISLVDLAGSERADS 256

  Fly   249 TLASGDRFKEGVNINKGLLALGNVINALGSGQAA-----------GYIPYRQSKLTRLLQDSLGG 302
            |.|.|.|.|||.||||.|..||.||:||....:|           .:||||.|.||.||:::|||
Zfish   257 TGAKGTRLKEGANINKSLTTLGKVISALAEMDSAPNKNKKKKKVESFIPYRDSVLTWLLRENLGG 321

  Fly   303 NSITLMIACVSPADYNVAETLSTLRYADRALQIKNKPVVNLDPHAAEVNMLKDVIQKLR------ 361
            ||.|.|:|.:||||.|..||||||||||||.||:...|:|.||:...|..||:.:.:|:      
Zfish   322 NSRTAMVAALSPADINYDETLSTLRYADRAKQIRCNAVINEDPNNRLVRELKEEVARLKDLLYAQ 386

  Fly   362 -----VELLSGGKMSSSLISAVGAAG---------LGAIPCEE-----SLAGSMANAAE------ 401
                 :|.||..|.:.|.|.||...|         .|..|...     |..||:::..:      
Zfish   387 GLGDIIENLSNYKANISSIQAVNQRGDFSTVTNAMTGMSPSPSLSALTSRVGSISSLHDRIMFSP 451

  Fly   402 -----IQRLKEQVRTLQDRNRKLQQELHQSLLDLTEKEMRAHIAEQA-------------HDKLR 448
                 |:||||..:.:.:.|...:::|.::  :....|..|.:||..             ..|..
Zfish   452 GSEEAIERLKETEKIIAELNETWEEKLRRT--EAIRMEREALLAEMGVAMREDGGTVGVFSPKKT 514

  Fly   449 SHVSELKNKLDQREQAQFGNENTNGDNEMRDFSLL-----VNRVHVELQRTQEELESQGHESRQR 508
            .|:                 .|.|.|..|.:..|.     :.:|..|...:::::...||..:..
Zfish   515 PHL-----------------VNLNEDPLMSECLLYYIKDGITKVGREDASSRQDIVLSGHFIKDE 562

  Fly   509 LSSRSHTEGGESGGDEVHEMLHSHSEEYTN-KQMNFAGELRNINRQLDLKQELH-----ERIMRN 567
            ....:.|......|..|.|.... :|.|.| |::.....|::.||.:..|..:.     |:..::
Zfish   563 HCIFTSTTNAIGEGTVVLEPCEG-AETYVNGKRVTEPTVLKSGNRIIMGKSHVFRFNDPEQARQD 626

  Fly   568 FSRLDSDDEDVKLRLCNQKIDDLEAERRDLMDQLRNIKSKDISAKLAEERRKRLQLLEQEISDLR 632
            ..|....|..|      :.:|...|:|..|..|..::|         :|..:|||.||.:..   
Zfish   627 RERTPCADTPV------EPVDWAFAQRELLEKQGIDMK---------QEMDQRLQELEDQYR--- 673

  Fly   633 RKLITQANLLKIRDKEREKIQNLSTEIRTMKESKVKLIRAMRGESEKFRQWKMVREKELTQLKSK 697
                          ||||:..||..:.|...|||                               
Zfish   674 --------------KEREEASNLLEQQRLDYESK------------------------------- 693

  Fly   698 DRKMQSEIVRQQTLHSKQRQVLKRKCEEALAANKRLKDALERQASAQAQRHKYKDNGGSAAGSSN 762
                         |.:.|:||..|...|.....:.|:|.:                         
Zfish   694 -------------LEALQKQVNSRYYPETTEEEEELEDEV------------------------- 720

  Fly   763 ANAKTDSWVDRELEIILSLIDAEH-----SLEQLMEDRAVINNHYHLLQQEKTSDPAEAAEQARI 822
                  .|..||.|:.|.......     ||..|:...|:.                 ..|...|
Zfish   721 ------PWTKRETELALWAFRKWRFYQFTSLRDLLWGNAIF-----------------LKEANAI 762

  Fly   823 LASLEEELEMRNAQISDLQQKVCPTDLDSRIRSLAEGVQSLGESRTVSKQLLKTLVQQRRLQASS 887
            ...|:::::.:...::|......|.||      |...:....|.|...:.::...||.::..|: 
Zfish   763 SVELKKKVQFQFVLLTDTLYSPLPPDL------LPPSIAKDREKRLFPRTIVAVEVQDQKNGAT- 820

  Fly   888 LNEQRTTLDELRAQLLDAQQQEDAASKRLRLLQSQHEEQMLAQQRAYEEKVSVLIRTANQRWAEA 952
               ...|||:||              :||.|::..::........|.|:...::         ..
Zfish   821 ---HYWTLDKLR--------------QRLDLMREMYDRAAEVPSTAVEDCDHIM---------SG 859

  Fly   953 RSPAEDQ-------QRNQILEELLSSREA----------LQQELDKLR-AKNKSKSKAVKSEPQD 999
            ..|..|:       .|..||...:|.|.:          ...::.:|. .::..|.:..:.|.:|
Zfish   860 GDPFYDRFPWFRLVGRTPILNTCMSERMSGLTLSPTLSDPDSDITELADERHYGKVEVEEEELED 924

  Fly  1000 LDDSFQIVDGNETVVLSDVSDDPDWV 1025
            |||...:.|....:...:..||.|.|
Zfish   925 LDDEIFVEDNGSELGREEEEDDDDGV 950

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klp3ANP_525053.1 KISc_KIF4 7..336 CDD:276823 143/357 (40%)
Smc <453..>985 CDD:440809 95/565 (17%)
Metallothio <1071..1115 CDD:395080
kif1abXP_009296795.1 KISc_KIF1A_KIF1B 4..361 CDD:276816 145/363 (40%)
Kinesin_assoc 358..538 CDD:465047 40/198 (20%)
FHA 514..628 CDD:469597 23/131 (18%)
ERM_helical 647..>702 CDD:466641 23/124 (19%)
KIF1B 828..875 CDD:463574 9/69 (13%)
DUF3694 1273..1428 CDD:463599
PH_KIFIA_KIFIB 1680..1782 CDD:269939
Blue background indicates that the domain is not in the aligned region.

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