DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Klp3A and Klp64D

DIOPT Version :9

Sequence 1:NP_001284830.1 Gene:Klp3A / 31240 FlyBaseID:FBgn0011606 Length:1212 Species:Drosophila melanogaster
Sequence 2:NP_523934.1 Gene:Klp64D / 38611 FlyBaseID:FBgn0004380 Length:677 Species:Drosophila melanogaster


Alignment Length:616 Identity:214/616 - (34%)
Similarity:311/616 - (50%) Gaps:62/616 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VAVALRVRPLVQSELDRGCRIAVERSADG--------APQVTVNR-NESYTYNYVFDIDDSQKDL 64
            |.|.:|.||:.::||..|...|:  |.|.        .|..|.|. .::|.::.|||...:|.||
  Fly    21 VRVVVRTRPMDKNELSAGALSAI--SVDKINRAITVMKPNATANEPPKTYYFDNVFDGGSNQMDL 83

  Fly    65 FETCVQAKVKKLLNGYNVTILAYGQTGSGKTYTMGTAFNGVLDDHVGVIPRAVHDIFTAIAEMQS 129
            :....:..|.|:|.|||.|||||||||:||||||  :.|.......|:||.|...||..||:.:.
  Fly    84 YVDTARPIVDKVLEGYNGTILAYGQTGTGKTYTM--SGNPDSPQTKGIIPNAFAHIFGHIAKAKE 146

  Fly   130 EFRFAVTCSFVELYQEQFYDLFSSKTRDKATVDIREVKNR----IIMPGLTELVVTSAQQVTDHL 190
            ..:|.|..|::|:|.|:..||. .|...|:.    |||.|    :.:..|:..||.:|..:.:.:
  Fly   147 NQKFLVRVSYMEIYNEEVRDLL-GKDVGKSL----EVKERPDIGVFVKDLSGYVVHNADDLENIM 206

  Fly   191 IRGSAGRAVAATAMNETSSRSHAIFTLTLVATKL-DGK-QSVTTSRFNLVDLAGSERCSKTLASG 253
            ..|:..|||.||.||:.||||||||::|:..::| :|. |.|...:..|||||||||.|||.|||
  Fly   207 RLGNKNRAVGATKMNQESSRSHAIFSITVERSELGEGDVQHVRMGKLQLVDLAGSERQSKTQASG 271

  Fly   254 DRFKEGVNINKGLLALGNVINALGSGQAAGYIPYRQSKLTRLLQDSLGGNSITLMIACVSPADYN 318
            .|.||...||..|..|||||:||..|::. :||||.|||||||||||||||.|:|.|.:||||.|
  Fly   272 QRLKEATKINLSLSVLGNVISALVDGKST-HIPYRNSKLTRLLQDSLGGNSKTVMCATISPADSN 335

  Fly   319 VAETLSTLRYADRALQIKNKPVVNLDPHAAEVNMLKDVIQKLRVELLSGGKMSSSLISAVGAAGL 383
            ..||:||||||.||..|:|:..:|.:|..|.:...::.|.:||.:|..|..:.....|:..    
  Fly   336 YMETISTLRYASRAKNIQNRMHINEEPKDALLRHFQEEIARLRKQLEEGDSLEEEPPSSEE---- 396

  Fly   384 GAIPCEESLAGSMANA-AEIQRLKEQVRTLQDRNRKLQQELHQSLLDLTEKEMRAHIAEQAHDKL 447
                 ||..|.....| .||:.....::.::.:.:|.:::......:|. |....|..|..|.|.
  Fly   397 -----EEDTADDELEAPLEIELESSTIQAVEKKPKKKREKTDAEKEELA-KRKNEHQKEIEHAKT 455

  Fly   448 RSHVSELKNKLDQREQAQFGNENTNGDN---EMRDFSLLVNRVHVELQRTQEELESQGHESRQRL 509
            ....  |:|||...|    |.....|:|   :.:...||:.:...||::.::..|:.....:|:.
  Fly   456 EQET--LRNKLVSLE----GKILVGGENLLEKAQTQELLLEQSIAELEQHEKSEEALKQTLQQKA 514

  Fly   510 SSRSHTEGGESGGDEVHEMLHSHSEEYTNKQMNFAGELRNINRQLDLKQELHER----IMRNFSR 570
            :.|...|       |.:..|...|...|.|.......|..:..:|..:|:.|:|    |..|...
  Fly   515 TERIDIE-------ERYSTLQDASTGITKKIHRVMQMLMGVKSELADQQQEHQREKEGIYENIRS 572

  Fly   571 LDSDDEDVKLRLCNQKIDD-LEAERRDLMDQ 600
            |..:     |.||...::. :..|.:.:::|
  Fly   573 LSRE-----LALCELVLNSYVPKEYQSMINQ 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klp3ANP_001284830.1 KISc_KIF4 7..336 CDD:276823 156/341 (46%)
Kinesin 14..335 CDD:278646 154/335 (46%)
Smc <396..>994 CDD:224117 44/214 (21%)
FlaC 522..633 CDD:225888 18/84 (21%)
TCR 1075..1110 CDD:281618
Klp64DNP_523934.1 KISc_KIF3 19..352 CDD:276822 156/340 (46%)
Kinesin 26..352 CDD:278646 154/335 (46%)
RILP-like <437..556 CDD:304877 29/132 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437777
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.