DRSC/TRiP Functional Genomics Resources

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Protein Alignment Klp3A and Khc

DIOPT Version :10

Sequence 1:NP_525053.1 Gene:Klp3A / 31240 FlyBaseID:FBgn0011606 Length:1212 Species:Drosophila melanogaster
Sequence 2:NP_476590.1 Gene:Khc / 36810 FlyBaseID:FBgn0001308 Length:975 Species:Drosophila melanogaster


Alignment Length:1046 Identity:276/1046 - (26%)
Similarity:468/1046 - (44%) Gaps:209/1046 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SEDPSCVAVALRVRPLVQSELDRGCRIAVERSADGAPQVTVNRNESYTYNYVFDIDDSQKDLFET 67
            :||  .:.|..|.|||..||...|.:..|:...:..........:.|.::.||..:.||:.::..
  Fly     9 AED--SIKVVCRFRPLNDSEEKAGSKFVVKFPNNVEENCISIAGKVYLFDKVFKPNASQEKVYNE 71

  Fly    68 CVQAKVKKLLNGYNVTILAYGQTGSGKTYTMGTAFNGVLDDHV--GVIPRAVHDIFTAIAEMQSE 130
            ..::.|..:|.|||.||.|||||.||||:||    .||:.|.|  |:|||.|:|||..|..|:..
  Fly    72 AAKSIVTDVLAGYNGTIFAYGQTSSGKTHTM----EGVIGDSVKQGIIPRIVNDIFNHIYAMEVN 132

  Fly   131 FRFAVTCSFVELYQEQFYDLFSSKTRDKATVDIREVKNRI-IMPGLTELVVTSAQQVTDHLIRGS 194
            ..|.:..|:.|:|.::..||...   .|..:.:.|.|||: .:.|.||..|:|.:.|.:.:..|.
  Fly   133 LEFHIKVSYYEIYMDKIRDLLDV---SKVNLSVHEDKNRVPYVKGATERFVSSPEDVFEVIEEGK 194

  Fly   195 AGRAVAATAMNETSSRSHAIFTLTLVATKLDGKQSVTTSRFNLVDLAGSERCSKTLASGDRFKEG 259
            :.|.:|.|.|||.|||||::|.:.:....|:.::.: :.:..||||||||:.|||.|.|....|.
  Fly   195 SNRHIAVTNMNEHSSRSHSVFLINVKQENLENQKKL-SGKLYLVDLAGSEKVSKTGAEGTVLDEA 258

  Fly   260 VNINKGLLALGNVINALGSGQAAGYIPYRQSKLTRLLQDSLGGNSITLMIACVSPADYNVAETLS 324
            .||||.|.||||||:||..|... :||||.|||||:||:|||||:.|.::.|.|||.:|.:||.|
  Fly   259 KNINKSLSALGNVISALADGNKT-HIPYRDSKLTRILQESLGGNARTTIVICCSPASFNESETKS 322

  Fly   325 TLRYADRALQIKNKPVVNLDPHAAEVN-----------MLKDVIQKLRVELL---SGGKMSS--- 372
            ||.:..||..:||...||.:..|.|..           .||..::||.:||.   :|..:.:   
  Fly   323 TLDFGRRAKTVKNVVCVNEELTAEEWKRRYEKEKEKNARLKGKVEKLEIELARWRAGETVKAEEQ 387

  Fly   373 ----SLISA------VGAAGLGAIPCEESLAG---SMANAAEIQRLKEQVRTLQDRNRKLQQELH 424
                .|:.|      |.||...|  .|.:||.   ::||.:....:.||.|...:..|..||   
  Fly   388 INMEDLMEASTPNLEVEAAQTAA--AEAALAAQRTALANMSASVAVNEQARLATECERLYQQ--- 447

  Fly   425 QSLLDLTEKEMRAHIAEQAHDKLRSHVSELKNKLDQREQAQFGNENTNGDNEMRDFSLLVNRVHV 489
                 |.:|:...:...|..::|:..|.|.:..:               .|..|::..|.:    
  Fly   448 -----LDDKDEEINQQSQYAEQLKEQVMEQEELI---------------ANARREYETLQS---- 488

  Fly   490 ELQRTQEELESQGHESRQRLSSRSHTEGGESGGDEVHEMLHSHSE---EYTNKQMNFAGELRNIN 551
            |:.|.|:|                    .||..:||.|:|.:..|   .|..|..    |:.|.|
  Fly   489 EMARIQQE--------------------NESAKEEVKEVLQALEELAVNYDQKSQ----EIDNKN 529

  Fly   552 RQLDLKQELHERIMRNFSRLDSDDEDVKLRLCNQKIDDLEA-ERRDLMDQLRNIKSKDISAKLAE 615
            :.:|   .|:|.:.:..|..::...::      |::.|:.: :::.:.:.|.|: .:|:.     
  Fly   530 KDID---ALNEELQQKQSVFNAASTEL------QQLKDMSSHQKKRITEMLTNL-LRDLG----- 579

  Fly   616 ERRKRLQLLEQEISDLRRKLITQANLLKIRD---KEREKIQNLSTEIRTMKESKVKLIRAMRGES 677
            |..:.:...|..| ||:...:...:..|:.:   ..|..|..:.||.:.:.:....:.......:
  Fly   580 EVGQAIAPGESSI-DLKMSALAGTDASKVEEDFTMARLFISKMKTEAKNIAQRCSNMETQQADSN 643

  Fly   678 EKFRQWKMVREKELTQ----LKSKDRKMQSEIVRQQTLHSKQRQVLKRKCEEALAANKRLKDAL- 737
            :|..::    ||:|.:    :...:.:|:|   .|:::...:.:  ||..||.:       |:| 
  Fly   644 KKISEY----EKDLGEYRLLISQHEARMKS---LQESMREAENK--KRTLEEQI-------DSLR 692

  Fly   738 ERQASAQAQRHKYKDNGGSAAGSSNANAKTDSWVD-------RELEIILSLIDA-EHSLEQLMED 794
            |..|..:|..|....|......:....:..||.:|       |::..:...|.| :|.::::.: 
  Fly   693 EECAKLKAAEHVSAVNAEEKQRAEELRSMFDSQMDELREAHTRQVSELRDEIAAKQHEMDEMKD- 756

  Fly   795 RAVINNHYHLLQQEKTSDPAEAAEQARILASLEEELEMRNAQISDLQQKVCPTDLDSRIRSLAEG 859
               ::....|..|:.|:|    .|:.|     :|:.|    :.|:||..:...:...:.|...:|
  Fly   757 ---VHQKLLLAHQQMTAD----YEKVR-----QEDAE----KSSELQNIILTNERREQARKDLKG 805

  Fly   860 VQSLGESRTVSKQLLKTLVQQRRLQASSLNEQRTTLDELRAQLLDAQQQEDAASKRLRLLQSQHE 924
            ::.     ||:|: |:||...|:|....|.::      :|..:::.:.:||..|           
  Fly   806 LED-----TVAKE-LQTLHNLRKLFVQDLQQR------IRKNVVNEESEEDGGS----------- 847

  Fly   925 EQMLAQQRAYEEKVSVLIRTANQRWAEARSPAEDQQRNQILEELLSSREALQQELDKLRAKNKSK 989
               |||    ::|:|.|....:             |..::.::|:.....|:.||.||..:.:..
  Fly   848 ---LAQ----KQKISFLENNLD-------------QLTKVHKQLVRDNADLRCELPKLEKRLRCT 892

  Fly   990 SKAVKS 995
            .:.||:
  Fly   893 MERVKA 898

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klp3ANP_525053.1 KISc_KIF4 7..336 CDD:276823 134/331 (40%)
Smc <453..>985 CDD:440809 103/551 (19%)
Metallothio <1071..1115 CDD:395080
KhcNP_476590.1 KISc_KHC_KIF5 10..333 CDD:276820 136/333 (41%)
Smc <341..>807 CDD:440809 108/567 (19%)
Khc_CBD_cc 856..925 CDD:467880 10/56 (18%)
Blue background indicates that the domain is not in the aligned region.

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