DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Klp3A and Cenpe

DIOPT Version :10

Sequence 1:NP_525053.1 Gene:Klp3A / 31240 FlyBaseID:FBgn0011606 Length:1212 Species:Drosophila melanogaster
Sequence 2:XP_063138291.1 Gene:Cenpe / 362044 RGDID:1307115 Length:2505 Species:Rattus norvegicus


Alignment Length:1415 Identity:345/1415 - (24%)
Similarity:574/1415 - (40%) Gaps:331/1415 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DPSCVAVALRVRPLVQSELDRGCRIAVERSADGAPQVTVNRNESYTYNYVFDIDDSQKDLFETCV 69
            :.:.|||.:|||||...|.:.|....:....|.......:..:|:.::.||..:::.|:::|...
  Rat     3 EEAAVAVCVRVRPLNSREEELGEASHIYWKTDKNAIYQSDGGKSFQFDRVFHSNETTKNVYEEIA 67

  Fly    70 QAKVKKLLNGYNVTILAYGQTGSGKTYT-MGTAFNGVLDDHVGVIPRAVHDIFTAIAEMQSEFRF 133
            ...:...:.|||.||.|||||.||||:| ||:      :|.:||||||:||||..|.:. .|..|
  Rat    68 VPIISSAIQGYNGTIFAYGQTASGKTHTMMGS------EDCLGVIPRAIHDIFQRIKKF-PEREF 125

  Fly   134 AVTCSFVELYQEQFYDLFSSKTRDKATVDIREVKNRIIMPGLTELVVTSAQQVTDHLIRGSAGRA 198
            .:..|::|:|.|...||..:..:.|..:...::...:.:..|||.||.:|:.....|..|...|.
  Rat   126 LLRVSYMEIYNETITDLLCNTQKVKPLIIREDINRNVYVADLTEEVVYTAEMALKWLATGEKNRH 190

  Fly   199 VAATAMNETSSRSHAIFTLTL------VATKLDGKQSVTTSRFNLVDLAGSERCSKTLASGDRFK 257
            ...|.||:.|||||.||.:.|      .::..||  |:..|..||||||||||.::|.|.|.|.|
  Rat   191 YGITKMNQRSSRSHTIFRMILESREKAESSNCDG--SIKVSHLNLVDLAGSERAAQTGAEGMRLK 253

  Fly   258 EGVNINKGLLALGNVINALGSGQAAGYIPYRQSKLTRLLQDSLGGNSITLMIACVSPADYNVAET 322
            ||..||:.||.||.||..|..||..|:|.||.|||||:||:|||||:.|.:|..::||  ::.||
  Rat   254 EGCYINRNLLILGQVIKKLSDGQVGGFINYRDSKLTRILQNSLGGNAKTRIICTITPA--SLDET 316

  Fly   323 LSTLRYADRALQIKNKPVVN------------------LDPHAAEVNML---------------- 353
            |:||::|..|..:||.|.||                  |.....|||..                
  Rat   317 LTTLQFASTAKYMKNTPYVNEVSNDEALLKRYRREIVDLKKQLEEVNTKTRAQEIEKDQLAQLLD 381

  Fly   354 -KDVIQKLRVELLSGGKMSSSLISAVGAAGLGAIPCEESLA-----------GSMANAAEIQRLK 406
             ||::||::.|.:.  .:...|:::      .:|..::.|.           |.|.::..::..|
  Rat   382 EKDLLQKVQDEKIQ--NLKRMLVTS------SSIALQQELEIKKKRRVTWCFGKMKDSNYVKEFK 438

  Fly   407 EQVRTLQDRNRKL--------------------QQELHQSLLD-LTEKEMRAHIAEQAHDKLRSH 450
            ... .:..|.||.                    :.|:..:.|: |.|.|..:..|..:.:.|.|.
  Rat   439 IPT-NITTRTRKTSVTPLRENSLMKLGESALSWESEVFDNTLEPLAEAEWSSATALLSEENLESE 502

  Fly   451 VSELKNK-----LDQREQAQFGNEN----TNGDNEMRDFSLLVNRVH--VELQRTQE-----ELE 499
            ::.|..:     ||. ||.:..||:    ....||:.:|..|..|..  .|||...|     .|.
  Rat   503 LTSLNTQYNNLVLDY-EQLRRENEDLKLKLKEKNELEEFEFLEQREEKDQELQLMHEVSNLKNLI 566

  Fly   500 SQGHESRQRLSSR--SHTEGGESGGDEVHEM---LHSHSEEYTNKQMNFAGELRNINRQLDLKQE 559
            ....|..|.|.:.  |..|..:...|::.|:   :.:...|.|...::::.|...     |||| 
  Rat   567 KHAEEYNQDLENELSSKVELLKEKEDQIKELQRYIDAQKSETTKTDLSYSSEATE-----DLKQ- 625

  Fly   560 LHERIMRNFSRLDSDDEDVKLRLCNQKIDDLEAERR--DLMDQLRNIKS------KDISAK--LA 614
                .||..|.||:...|.|......:.::||.:.|  :|.|..:.:::      :.:.||  :.
  Rat   626 ----AMRTLSDLDTVALDAKRESAFLRSENLELKERINELSDSCKQMENGIQMYQRQLEAKKQVQ 686

  Fly   615 EERRKRLQLLEQEISDLR--------------RKLITQANLLKIRDKEREKIQNLSTEIRTMKES 665
            .:..|.|||..||||.|.              .|.||  :|.|..:||.|:.:.|..|:..:.| 
  Rat   687 ADLEKELQLAFQEISKLSALVDGKGLLSNLELEKRIT--DLQKELNKEVEEKETLQKEVHLLSE- 748

  Fly   666 KVKLIRAMRGESEKFRQWKMVREKELTQLKSKDRKMQSEIVRQQTLHSKQRQVLKRKCEEALAAN 730
                ::::..|.|..|:....:.:||..:.::..|:.||:..:                     :
  Rat   749 ----LKSLPSEVETLRRELHEKSEELCVITTEREKLFSEMAHK---------------------D 788

  Fly   731 KRLKDALERQASAQAQRHKYKDNGGSAAGSSNANAKTDSWVDRELEIILSL-IDAEHSLEQLMED 794
            .|::..||...:.       ||:..::..|..::       |.|.:.:.|| ::.:|..|:::|:
  Rat   789 SRIQGLLEEIGNT-------KDDLAASQLSQRSS-------DEECQALKSLHVELKHRQEEVLEE 839

  Fly   795 RAVINNHYHLLQQEKTSDPAEAAEQARILASLEEELEMRNAQISDLQQKVCPTDLDSRIRSLAEG 859
            ...:........||.....||..|....:..|.|:||.|::.:...:::  ...|..:::...|.
  Rat   840 SERVKQELSQKTQELAQKTAEGQEMLNQMEELREKLERRDSSLQSAEKE--KNLLTEKLQQTLEE 902

  Fly   860 VQSLGESRTVSKQLLKTLVQQRRLQASSLNEQRTTLDELRAQLLDAQQQE-DAASKRLRLLQS-- 921
            |::|.:.:...|||.::|..:|              |:||:.:.|..... |...:.|..|:|  
  Rat   903 VRALTQEKNDLKQLQESLQTER--------------DQLRSDIQDTVNMNIDTQEQLLNALESLK 953

  Fly   922 QHEEQM-LAQQRAYEE-------------------------KVSVLIRTANQRWAEARSPAEDQQ 960
            ||:|.: :.:.:|.||                         :.::|..:|:..........|.::
  Rat   954 QHQETINMLKMKATEEMSDHLPIKGREGSSDEVEQKLDGIDEENLLAESAHTVVGSGEDHGETEE 1018

  Fly   961 RNQILEELLSSREALQQELDKLRAKNKSKSKAVKSEPQDLDDSFQI-VDGNETV-VLSD------ 1017
            :.:| :.||.....|||.|:.:.|: |.:.|      .||.::.:: |:..|.: :|.|      
  Rat  1019 QRKI-DSLLQENSRLQQTLESIIAE-KEQLK------MDLKENIEMSVENQEELRILRDELKRQQ 1075

  Fly  1018 --VSDDPDWVPSTS-------------------KSKRIQSDSRNVISPPE---KQDANVTSLGNS 1058
              .:.:.|.|...|                   |::::|...:.::|..|   :..|.||.|.|.
  Rat  1076 EIAAQEKDHVTEKSEELSRAHERLAEIEEKLKEKNQKLQETQQQLVSIQEAMSEMQAKVTDLENL 1140

  Fly  1059 SIQSLNSTSATEDGKRCKGCKCRTKCTTKRCGCLSGNNACSETCVCKSNCRNPL----------- 1112
            ..:..|...|.|            :..|:|.......:...|.....:..||.|           
  Rat  1141 QNEFRNQALALE------------RVETERLELAQKLHENYEKMESITKERNDLKELQESFEIEK 1193

  Fly  1113 --------------------------NLKDHASQCGDGDGQKDETE-DADKSDDDGDDEPQTSKE 1150
                                      |||::.....:..|...|.| .|..:.|.|...|.:..|
  Rat  1194 KQLKEYAREMESAGLQTKEQLNIAHANLKEYQEIIKELRGSISEKEAQASSTQDTGKTNPASQGE 1258

  Fly  1151 NAV---KFVTPEAPGKVVASPKQTLQEPKAAATPLMNSNVVEDINGPKLA 1197
            ..|   :.:.|:|.....::.|.:..||....:...:|...|.|....||
  Rat  1259 TPVPREQELLPDAEEARASAEKGSELEPVEEHSRTAHSLTTEGIEMEILA 1308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klp3ANP_525053.1 KISc_KIF4 7..336 CDD:276823 133/335 (40%)
Smc <453..>985 CDD:440809 129/606 (21%)
Metallothio <1071..1115 CDD:395080 7/80 (9%)
CenpeXP_063138291.1 None

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