DRSC/TRiP Functional Genomics Resources

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Protein Alignment Klp3A and Kifc3

DIOPT Version :10

Sequence 1:NP_525053.1 Gene:Klp3A / 31240 FlyBaseID:FBgn0011606 Length:1212 Species:Drosophila melanogaster
Sequence 2:XP_038953626.1 Gene:Kifc3 / 307644 RGDID:1307693 Length:1033 Species:Rattus norvegicus


Alignment Length:352 Identity:130/352 - (36%)
Similarity:196/352 - (55%) Gaps:46/352 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VAVALRVRPLVQSELDRGCRIAVERSADGAPQVTVNRNE-------------SYTYNYVFDIDDS 60
            :.|..||||:.:.:         ....:....||.:.::             |:..:.||....|
  Rat   601 IRVIARVRPVTKED---------GEGPEATNAVTFDPDDDSIIHLLHKGKPVSFELDKVFSPWAS 656

  Fly    61 QKDLFETCVQAKVKKLLNGYNVTILAYGQTGSGKTYTM-GTAFNGVLDDHVGVIPRAVHDIFTAI 124
            |:|:|:. |||.:...::|:||.|.||||||:|||||| ||      .::.|:..||:..:|:.:
  Rat   657 QQDVFQE-VQALITSCIDGFNVCIFAYGQTGAGKTYTMEGT------PENPGINQRALQLLFSEV 714

  Fly   125 AEMQSEFRFAVTCSFVELYQEQFYDLFSSKTRDKATVDIR---EVKNRIIMPGLTELVVTSAQQV 186
            .|..|::::.:|.|..|:|.|...||...:.::|  ::||   :...::.:|||||..|.|...:
  Rat   715 QEKASDWQYNITVSAAEIYNEVLRDLLGKEPQEK--LEIRLCPDGSGQLYVPGLTEFQVQSVDDI 777

  Fly   187 TDHLIRGSAGRAVAATAMNETSSRSHAIFTLTL----VATKLDGKQSVTTSRFNLVDLAGSERCS 247
            ......|...|....|.:||.||||||:..:|:    .:|.|.     ||.:.||||||||||..
  Rat   778 NKVFEFGYNNRTTEFTNLNEHSSRSHALLIVTVRGVDCSTGLR-----TTGKLNLVDLAGSERVG 837

  Fly   248 KTLASGDRFKEGVNINKGLLALGNVINALGSGQAAGYIPYRQSKLTRLLQDSLGGNSITLMIACV 312
            |:.|.|:|.:|..:||:.|.|||:||.||.|.|  |::|:|.||||.||||||.|:|.|||:..|
  Rat   838 KSGAEGNRLREAQHINRSLSALGDVIAALRSRQ--GHVPFRNSKLTYLLQDSLSGDSKTLMVVQV 900

  Fly   313 SPADYNVAETLSTLRYADRALQIKNKP 339
            ||.:.|.:|||.:|::|:|...::..|
  Rat   901 SPVEKNTSETLYSLKFAERVRSVELGP 927

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klp3ANP_525053.1 KISc_KIF4 7..336 CDD:276823 129/347 (37%)
Smc <453..>985 CDD:440809
Metallothio <1071..1115 CDD:395080
Kifc3XP_038953626.1 Spc7 <219..345 CDD:197874
SMC_prok_B <286..595 CDD:274008
KISc_C_terminal 598..925 CDD:276817 129/348 (37%)
Blue background indicates that the domain is not in the aligned region.

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