DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Klp3A and klp-19

DIOPT Version :9

Sequence 1:NP_001284830.1 Gene:Klp3A / 31240 FlyBaseID:FBgn0011606 Length:1212 Species:Drosophila melanogaster
Sequence 2:NP_499742.1 Gene:klp-19 / 176750 WormBaseID:WBGene00002229 Length:1083 Species:Caenorhabditis elegans


Alignment Length:1186 Identity:325/1186 - (27%)
Similarity:542/1186 - (45%) Gaps:235/1186 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSEDPSCVAVALRVRPLVQSELDRGCRIAVERSADGAPQVTVNRNESYTYNYVFDIDDSQKDLF 65
            |||:  :.:.|.:|.||:...|...|....|: ..:...|:.:|.:.::|::.||.....|:.::
 Worm     1 MSSD--ASLRVVVRARPMNGRETKEGASRCVQ-FYENTKQIVINESATFTFDAVFADTSDQESVY 62

  Fly    66 ETCVQAKVKKLLNGYNVTILAYGQTGSGKTYTMGTAFN-GVLDDHVGVIPRAVHDIFTAIAEMQS 129
            ||.....:.::..|:|.|:||||||||||||||||..| |..:...|:|||.|..:|..|...::
 Worm    63 ETTALPLLDRIFAGFNATVLAYGQTGSGKTYTMGTEDNVGTDEMRRGIIPRLVSALFQRIMNTEA 127

  Fly   130 EFRFAVTCSFVELYQEQFYDLFSSKTRDKATVDIREVKNRIIMPGLTELVVTSAQQVTDHLIRGS 194
            ...||||.|..|:|.:..|||...   ||..:::...:....:..||.:.|...:.....|..|.
 Worm   128 PESFAVTVSMFEVYGDNVYDLLRP---DKVKLNVHGDEKNCTVVNLTAVPVIDLKGALKQLAVGC 189

  Fly   195 AGRAVAATAMNETSSRSHAIFTLTLVATKLDGKQSVTTSRFNLVDLAGSERCSKTLASGDRFKEG 259
            ..|..|.||||..||||||:||:.:..|......|..:::..|||||||||..||.|.|:|.|||
 Worm   190 HYRTKAETAMNAMSSRSHAVFTVFVEKTATAECDSAFSAKLQLVDLAGSERLKKTEAEGNRMKEG 254

  Fly   260 VNINKGLLALGNVINALGSGQAAGYIPYRQSKLTRLLQDSLGGNSITLMIACVSPADYNVAETLS 324
            :|||.|||.|..||.||.:.|.  :||||.|.:||:|||||||||.|:.:||:||||.|..|||:
 Worm   255 ININGGLLILSQVIAALATKQK--HIPYRNSVITRVLQDSLGGNSFTVFLACISPADSNSQETLN 317

  Fly   325 TLRYADRALQIKNKPVVNLDPHAAEVNMLKDVIQKLRVELLSGGKMSSSLISAVGAAGLGAIPCE 389
            ||||||||.||||||:||.:|.|.|:.:|:..:::|:       |.::.|...:..|        
 Worm   318 TLRYADRAKQIKNKPIVNKNPKAEEIAILQAQLKRLQ-------KENADLKQGIAPA-------- 367

  Fly   390 ESLAGSMANAAEIQRLKEQV--RTLQDRNRKLQQ-ELHQSLLDLTEKEMRAHIAEQAHDKLRSHV 451
            |.......|:|||..|||:|  :|.|.:.|.::| |....:..||:|..|   .|:...||:|.:
 Worm   368 EVRFNDANNSAEILSLKEEVVRKTEQLKERAMKQSECIIRMSALTQKNSR---LEEDKAKLQSML 429

  Fly   452 SELKNKLDQREQAQFGNENTNGDNEMRDFSLLVNRVHVELQRTQEELESQGHESRQRLSSRSHTE 516
            ::::              ||..:.||.|.:.:|..:...:..|:|.         ..|:...:.|
 Worm   430 TDVR--------------NTVLNEEMLDAAEVVRSIQQVVGDTEES---------TTLADDDNDE 471

  Fly   517 ---GGESGGDEVHEMLHSHSEEYTNKQMNFAGELRNINRQLDLKQELHERIM---RNFSRLDSDD 575
               ||:.  |.:::         |.:......||.::.:|:.:|.|..::.:   |.|.......
 Worm   472 TALGGQD--DTIYD---------TERLPELQAELDDLEKQIAMKDENRQKALDEQRAFIEAMQQR 525

  Fly   576 EDVKLRLCNQKIDDLEAERRDLMDQLRNIKSKDISAKLAEERRKRLQLLEQEISDLRRKLITQAN 640
            |..|.:|. .:|.:||.|...|..:.:.:.:   :||||||||::|:.||::.::.::.|.....
 Worm   526 ESEKTQLV-VRISELETEMNKLRQEGKKVTT---AAKLAEERRQKLKDLERQHAEDKKVLNDMKK 586

  Fly   641 LLKIRDKEREKIQNLSTEIRTMKESKVKLIRAMRGESEKFRQWKMVREKELTQLKSKDRKMQSEI 705
            |.:.|.:..|.::....|::.:|..:::|:|..|.|:.||:.:|...|:|:.|:|||.:|.::::
 Worm   587 LQETRRRMEETLKKTEDELKNLKTQRLRLLREQRAEASKFQAFKQKHEREMAQMKSKLQKRENDV 651

  Fly   706 VRQQTLHSKQRQVLKRKCEEALAANKRLK------------------------DALERQASAQ-- 744
            ..|:.:..::..||:.:..||..|||.|:                        :.||.:..||  
 Worm   652 AIQKRMTDQKLTVLQMRLTEANRANKTLRELNLKRANRKSSPTNASALQNMIEEELEHEMCAQRS 716

  Fly   745 --------AQRHKYKDN----------GG-----SAAGSSNANAKTDSWVDRELEIILSLIDAEH 786
                    .|||....|          ||     ||:...|.:...:...:.|::....|.....
 Worm   717 HWLCEDLRRQRHDLMQNINTVESMKFEGGKRRRISASADPNVSVVIEGEEEFEVKRQKELTFLRA 781

  Fly   787 SLEQLMED-RAVINNHYHLLQQEKTSD----------PAEAAEQARILASLEEELEMR------- 833
            |||.|.|: :..:.|......:|:.:.          ||..|..|:.:|.:.:|:|:.       
 Worm   782 SLETLNEEIKDSLRNETIAGNEERANSRWEKVPAEMRPAFEAVYAQAVAHIRKEIELEFKLARTK 846

  Fly   834 ---NAQIS-----DLQQKVCPTDLDSRIRSLAEGVQSLGESRTVSKQLLKTLVQQRRLQASSLNE 890
               .|:|:     :.::|....::.::.|.||:.::............|..|:::.|:..:::.:
 Worm   847 SEFTAKIASKASHEEKRKKEDEEMRAKYRELAQCLEDAKSGLHEKIAFLLCLIKENRVDENAIQQ 911

  Fly   891 QRTTLDELRAQLLDAQQQEDAASKRLRLLQSQHEEQMLAQQRAYEEKVSVLIRTANQRWAEARSP 955
                .:.|:.|..|.:|:...||:|                           :|.|  :....:|
 Worm   912 ----FESLKNQFCDVEQKVKKASRR---------------------------KTTN--FMGGLTP 943

  Fly   956 AEDQQRNQ------------ILEELLSSREALQQE--------LDKLRAKNKSKSKAVKSEPQDL 1000
            ..:.|||:            :..|.::..::..|:        ::..|..:.:..:.|...|...
 Worm   944 KPELQRNERARRAVKYYGNVVNSEDVTMDDSRHQKRKDHSLLAVEMNRTTDDNVKRRVAMSPIKC 1008

  Fly  1001 DDSFQIVDGNE--------------------TVVLSDVSDDPDWVPSTSKSKRI-----QSDSRN 1040
            ||..::.:.:|                    |:||.|..      ||.|.|..:     .|::..
 Worm  1009 DDDTRLTEEDEDIENEAMNNATFVKDSFNSATIVLDDSQ------PSPSNSTFVIGAAPTSEADG 1067

  Fly  1041 VISPPEKQDANVTSLG 1056
            |  ||.|:.:..|.||
 Worm  1068 V--PPIKRKSRRTDLG 1081

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klp3ANP_001284830.1 KISc_KIF4 7..336 CDD:276823 141/329 (43%)
Kinesin 14..335 CDD:278646 139/321 (43%)
Smc <396..>994 CDD:224117 144/701 (21%)
FlaC 522..633 CDD:225888 28/113 (25%)
TCR 1075..1110 CDD:281618
klp-19NP_499742.1 KISc 6..326 CDD:276812 139/325 (43%)
SMC_prok_A <342..621 CDD:274009 76/334 (23%)
Smc <481..825 CDD:224117 81/356 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159680
Domainoid 1 1.000 119 1.000 Domainoid score I3604
eggNOG 1 0.900 - - E2759_KOG0244
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H69022
Inparanoid 1 1.050 356 1.000 Inparanoid score I1305
Isobase 1 0.950 - 0 Normalized mean entropy S3090
OMA 1 1.010 - - QHG53505
OrthoDB 1 1.010 - - D74122at33208
OrthoFinder 1 1.000 - - FOG0003140
OrthoInspector 1 1.000 - - oto18404
orthoMCL 1 0.900 - - OOG6_100464
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3568
SonicParanoid 1 1.000 - - X2108
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1413.690

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