DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Klp3A and klp-17

DIOPT Version :10

Sequence 1:NP_525053.1 Gene:Klp3A / 31240 FlyBaseID:FBgn0011606 Length:1212 Species:Drosophila melanogaster
Sequence 2:NP_496446.3 Gene:klp-17 / 174750 WormBaseID:WBGene00002227 Length:471 Species:Caenorhabditis elegans


Alignment Length:329 Identity:118/329 - (35%)
Similarity:175/329 - (53%) Gaps:32/329 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VAVALRVRPLVQSELDRGCRIAVERSADGAPQVTVNRNESYTYNYVFDIDDSQKDLFETCVQAKV 73
            :.||:|||..   |.|.....::....:...|.|..::.:|::.:||....:|..:|     .::
 Worm   146 IRVAIRVRDF---ERDGSSNFSIISQNEVQLQQTTGQSNTYSFEHVFFPPTAQSGVF-----GEI 202

  Fly    74 KKL----LNGYNVTILAYGQTGSGKTYTMGTAFNGVLDDHVGVIPRAVHDIFTA----IAEMQSE 130
            |:|    |:|.||.::|||.||||||:||....:.   |..||||||:..:...    :|.:...
 Worm   203 KELIMCALHGKNVCLIAYGPTGSGKTFTMRGEDSA---DSEGVIPRAIRFMLEQSKRDLAMIGWN 264

  Fly   131 FRFAVTCSFVELYQEQFYDLFSSKTRDKATVDIREVKNRIIMPGLTELVVTSAQQVTDHLIRGSA 195
            ::|  ..||:|:|.|:.|||...|  .|..|.|...|..::  ||.::.:.:...|...|....:
 Worm   265 YKF--QASFIEVYNEEVYDLLDGK--QKLEVKINGSKTNVV--GLKKIEIGNISDVDVILNLADS 323

  Fly   196 GRAVAATAMNETSSRSHAIFTLTLVATKLDGKQSVTTSRFNLVDLAGSERCSKTLASGDRFKEGV 260
            .|:||:||.||.||||||||.:.:......|:  :.....||||||||||..:|.|.|.:|.|..
 Worm   324 QRSVASTASNEHSSRSHAIFQIFVDGQNASGE--MVQCCLNLVDLAGSERAKETQARGKQFTELT 386

  Fly   261 NINKGLLALGNVINALGSGQAAGYIPYRQSKLTRLLQDSLG-GNSITLMIACVSPADYNVAETLS 324
            |||:.|..|...|.|..:..:  ::|||.||||.:|::.|| |:|.|:.||..:|.|  ||||..
 Worm   387 NINQSLSTLKKCIRAQMTKMS--HVPYRDSKLTMVLREYLGAGSSKTMFIAHANPRD--VAETKR 447

  Fly   325 TLRY 328
            ||.:
 Worm   448 TLEF 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klp3ANP_525053.1 KISc_KIF4 7..336 CDD:276823 118/329 (36%)
Smc <453..>985 CDD:440809
Metallothio <1071..1115 CDD:395080
klp-17NP_496446.3 Mplasa_alph_rch <11..146 CDD:275316 118/329 (36%)
PRK03992 70..>116 CDD:179699
KISc 145..464 CDD:214526 118/329 (36%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.