DRSC/TRiP Functional Genomics Resources

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Protein Alignment Klp3A and Kif2a

DIOPT Version :10

Sequence 1:NP_525053.1 Gene:Klp3A / 31240 FlyBaseID:FBgn0011606 Length:1212 Species:Drosophila melanogaster
Sequence 2:NP_001361656.1 Gene:Kif2a / 16563 MGIID:108390 Length:743 Species:Mus musculus


Alignment Length:533 Identity:152/533 - (28%)
Similarity:244/533 - (45%) Gaps:93/533 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DPSCVAVALRVRPLVQSELD-RGCRIAVERSAD----GAPQVTVN-----RNESYTYNYVFDIDD 59
            |...:.|.:|.|||.:.|.. :...:....|.|    ..|:..|:     .|:::.::|.||...
Mouse   219 DEHRICVCVRKRPLNKKETQMKDLDVITIPSKDVVMVHEPKQKVDLTRYLENQTFRFDYAFDDSA 283

  Fly    60 SQKDLFETCVQAKVKKLLNGYNVTILAYGQTGSGKTYTMGTAFNGVLDD-HVGVIPRAVHDIFTA 123
            ..:.::....:..|:.:......|..||||||||||:|||..|:|...| ..|:...|..|:|..
Mouse   284 PNEMVYRFTARPLVETIFERGMATCFAYGQTGSGKTHTMGGDFSGKNQDCSKGIYALAARDVFLM 348

  Fly   124 IAEMQ-SEFRFAVTCSFVELYQEQFYDLFSSKTRDKATVDIREVKNRIIMPGLTELVVTSAQQVT 187
            :.:.. .:....|..:|.|:|..:.:||.:.||:.:.   :.:.|.::.:.||.|..|...:.|.
Mouse   349 LKKPNYKKLELQVYATFFEIYSGKVFDLLNRKTKLRV---LEDGKQQVQVVGLQEREVKCVEDVL 410

  Fly   188 DHLIRGSAGRAVAATAMNETSSRSHAIFTLTLVAT-KLDGKQSVTTSRFNLVDLAGSERCSKTLA 251
            ..:..|::.|....|:.|..||||||:|.:.|... ||.||       |:|:||||:||.:.| :
Mouse   411 KLIDIGNSCRTSGQTSANAHSSRSHAVFQIILRRKGKLHGK-------FSLIDLAGNERGADT-S 467

  Fly   252 SGDRFK--EGVNINKGLLALGNVINALGSGQAAGYIPYRQSKLTRLLQDS-LGGNSITLMIACVS 313
            |.||..  ||..|||.||||...|.|||..:.  :.|:|.||||::|:|| :|.||.|.|||.:|
Mouse   468 SADRQTRLEGAEINKSLLALKECIRALGRNKP--HTPFRASKLTQVLRDSFIGENSRTCMIATIS 530

  Fly   314 PADYNVAETLSTLRYADRALQI-----------------KNKPVVNLDPHAAEVNMLKDVIQKLR 361
            |...:...||:|||||:|..:.                 ...|..:.|..:..:..:|:    |.
Mouse   531 PGMASCENTLNTLRYANRVKEFGISPSDIPFSQGGGSRPDLSPSYDYDDFSPSITRVKE----LT 591

  Fly   362 VELLSGGKM-------SSSLISAVGAAGLGAIP--------CEES-------LAGSMANAAEIQR 404
            |...:.|.:       .|.:.......|:|:.|        ||::       |.......:::..
Mouse   592 VNPAAAGDVHPIMHHPPSQIDDLETQWGVGSSPQRDDLKLLCEQNEEEVSPQLFTFHEAVSQMVE 656

  Fly   405 LKEQVRTLQDRNRKLQQEL-----HQSLLDLTEK----------EMRAHIAEQAHD---KLRSHV 451
            ::|||  ::|.....|:.:     .::||::||:          ::.| |.||..|   :||..|
Mouse   657 MEEQV--VEDHRAVFQESIRWIEDEKALLEMTEEVDYDVDSYATQLEA-ILEQKIDILTELRDKV 718

  Fly   452 SELKNKLDQREQA 464
            ...:..|.:.|||
Mouse   719 KSFRAALQEEEQA 731

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klp3ANP_525053.1 KISc_KIF4 7..336 CDD:276823 117/361 (32%)
Smc <453..>985 CDD:440809 4/12 (33%)
Metallothio <1071..1115 CDD:395080
Kif2aNP_001361656.1 KISc_KIF2_like 222..550 CDD:276818 117/340 (34%)
Blue background indicates that the domain is not in the aligned region.

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