DRSC/TRiP Functional Genomics Resources

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Protein Alignment Klp3A and kif5c

DIOPT Version :10

Sequence 1:NP_525053.1 Gene:Klp3A / 31240 FlyBaseID:FBgn0011606 Length:1212 Species:Drosophila melanogaster
Sequence 2:XP_002935337.3 Gene:kif5c / 100493873 XenbaseID:XB-GENE-977474 Length:959 Species:Xenopus tropicalis


Alignment Length:1054 Identity:300/1054 - (28%)
Similarity:479/1054 - (45%) Gaps:241/1054 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DPS-C-VAVALRVRPLVQSELDRGCR-IAVERSADGAPQVTVNRNESYTYNYVFDIDDSQKDLFE 66
            ||: | :.|..|.|||.::|:.||.: |.|.:..|   .|.|..::.|.::.||..:.:|:.::.
 Frog     3 DPAECSIKVMCRFRPLNKAEIQRGDKFIPVFKGED---TVVVGPSKPYVFDKVFPSNTTQEHVYS 64

  Fly    67 TCVQAKVKKLLNGYNVTILAYGQTGSGKTYTMGTAFNGVLDDH--VGVIPRAVHDIFTAIAEMQS 129
            .|.:..||.:|:|||.||.|||||.||||:||    .|.|.||  :|:|||..||||..|..|..
 Frog    65 ACAKQIVKDVLDGYNGTIFAYGQTSSGKTHTM----EGKLHDHQMMGIIPRIAHDIFDHIYSMDE 125

  Fly   130 EFRFAVTCSFVELYQEQFYDLFS-SKTRDKATVDIREVKNRI-IMPGLTELVVTSAQQVTDHLIR 192
            ...|.:..|:.|:|.::..||.. |||    .:.:.|.|||: .:.|.||..|:|.::|.|.:..
 Frog   126 NLEFHIKVSYFEIYLDKIRDLLDVSKT----NLAVHEDKNRVPFVKGCTERFVSSPEEVMDVIDE 186

  Fly   193 GSAGRAVAATAMNETSSRSHAIFTLTLVATKLDGKQSVTTSRFNLVDLAGSERCSKTLASGDRFK 257
            |.|.|.||.|.|||.|||||:||.:.:....::.::.: :.:..||||||||:.|||.|.|....
 Frog   187 GKANRHVAVTNMNEHSSRSHSIFLINIKQENVETEKKL-SGKLYLVDLAGSEKVSKTGAEGAVLD 250

  Fly   258 EGVNINKGLLALGNVINALGSGQAAGYIPYRQSKLTRLLQDSLGGNSITLMIACVSPADYNVAET 322
            |..||||.|.||||||:||..|... ::|||.||:||:||||||||..|.:|.|.||:.:|.|||
 Frog   251 EAKNINKSLSALGNVISALAEGTKT-HVPYRDSKMTRILQDSLGGNCRTTIIICCSPSIFNEAET 314

  Fly   323 LSTLRYADRALQIKNKPVVNLDPHAAE-----------VNMLKDVIQKLRVELLSGGKMSSSLIS 376
            .|||.:..||..|||...|||:..|.|           ...||::||.|.:||....:..     
 Frog   315 KSTLMFGQRAKTIKNTVSVNLELTAEEWKKKYEKEKDKTKSLKNIIQHLEMELNRWRRGE----- 374

  Fly   377 AVGAAGLGAIPCEESLAGSMANAAEIQRLKEQVRTLQDRNRKLQQELHQSLLDLTEKEMRAHIAE 441
                    |:|.:|..:.           |:| :||:..:.  ...:...|:..|      :|:.
 Frog   375 --------AVPVDEQTSA-----------KDQ-KTLEPCDN--TPVIDNGLVGAT------NISS 411

  Fly   442 QAHDKLRSHVSELKNKLDQREQAQFGNENTNGDNEMRDFSLLVNRVHVELQRTQEELES--QGHE 504
            :...|....::.|..:||.:            |:|:...|.|:.::..::...:|.|.|  :.:|
 Frog   412 EEKKKYDEDIASLYGQLDDK------------DDEINQQSQLIEKLKQQMLDQEELLASTRRDYE 464

  Fly   505 SRQRLSSRSHTEGGESGGDEVHEMLHSHSEEYTNKQMNFAGELRNINRQLDLKQELHERIMRNFS 569
            ..|...:|...| .::..|||.|:|.:..|    ..:|:..:.:.:..:..|.::|.|.:     
 Frog   465 KIQEELTRLQIE-NDAAKDEVKEVLQALEE----LAVNYDQKSQEVEDKTKLNEQLSEEL----- 519

  Fly   570 RLDSDDEDVKLRLCNQKIDDLEAERRDLMDQLRNIKSKDISAKLAEERRKR----LQLLEQEISD 630
                          .||..:|...:|:| .||:         :|:..:|||    |.||.:::.:
 Frog   520 --------------TQKTTNLTVTQREL-SQLQ---------ELSNHQRKRTTEILNLLLKDLGE 560

  Fly   631 L-----RRKLITQANLLKIRDKE----REKIQNLSTEIRTMKESKVKLIRAMRGESEKFRQWKMV 686
            :     ...:.|.|.:..:.::|    |..|..:.:|::::.....:|..|....:.|..    .
 Frog   561 IGGIVGTNDVKTLAEVNGVIEEEFTMARLYISKMKSEVKSLVNRSKQLESAQIEANRKIN----A 621

  Fly   687 REKELT--QLKSK--DRKMQSEIVRQQTLHSKQRQVLKRKCEEALAANKRLKDALERQAS---AQ 744
            .||||.  ||.|.  :.|::|.....|.:..::||:     |||       :|||..:.:   ||
 Frog   622 SEKELAACQLLSSQHEAKIKSLTDYMQNMEQRRRQL-----EEA-------QDALNEELARLHAQ 674

  Fly   745 AQRHKYKDNGGSAAGSSNANAKTDSWVDRELEIILSLIDAEH---SLEQLMEDRAVINNHYHLLQ 806
            .:.||.                  |:.|:|.|.:..|.|||.   :|||.||      :|....|
 Frog   675 EKMHKV------------------SFQDKEKEHLTRLQDAEEIKKTLEQQME------SHREAHQ 715

  Fly   807 QEKTSDPAEAAEQARILASLEEELEMRNAQISDLQQKVCPTDLDSRIRSLAEGVQSLGESRTVSK 871
            ::              |:.|.:|:|.:...|.||:      ||:.::       |...:..|...
 Frog   716 KQ--------------LSRLRDEIEEKQKMIDDLK------DLNQKL-------QLQLDKLTSDY 753

  Fly   872 QLLKTLVQQRRLQASS---LNEQRTTLDELRAQLLDAQQQEDAASKRLRLLQSQHE--EQMLA-- 929
            :.|||..:||......   |||:|....|      |.:..|:..::.|:.|.:..:  .|.||  
 Frog   754 EKLKTEEEQREEDLQKLVLLNEKREQSRE------DLKGLEETVARELQTLHNLRKLFIQDLALR 812

  Fly   930 -QQR------------AYEEKVSVLIRTANQRWAEARSPAEDQQRNQILEELLSSREALQQELDK 981
             |:|            |.::|:|.|....             :|..::.::|:.....|:.||.|
 Frog   813 VQKRVELDSDNGGGSAAQKQKISFLENNL-------------EQLTKVHKQLVRDNADLRCELPK 864

  Fly   982 LRAKNKSKSKAVKS 995
            |..:.::.::.||:
 Frog   865 LEKRLRATAERVKA 878

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klp3ANP_525053.1 KISc_KIF4 7..336 CDD:276823 145/335 (43%)
Smc <453..>985 CDD:440809 125/576 (22%)
Metallothio <1071..1115 CDD:395080
kif5cXP_002935337.3 KISc_KHC_KIF5 6..327 CDD:276820 145/333 (44%)
EnvC 452..>676 CDD:443969 60/273 (22%)
SMC_prok_B 580..>912 CDD:274008 87/385 (23%)
Khc_CBD_cc 836..905 CDD:467880 10/56 (18%)
Blue background indicates that the domain is not in the aligned region.

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