DRSC/TRiP Functional Genomics Resources

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Protein Alignment Klp3A and kifc2

DIOPT Version :10

Sequence 1:NP_525053.1 Gene:Klp3A / 31240 FlyBaseID:FBgn0011606 Length:1212 Species:Drosophila melanogaster
Sequence 2:XP_002941548.2 Gene:kifc2 / 100485082 XenbaseID:XB-GENE-995645 Length:924 Species:Xenopus tropicalis


Alignment Length:352 Identity:134/352 - (38%)
Similarity:199/352 - (56%) Gaps:23/352 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VAVALRVRPLVQSELDRG---CRIAVERSADGAPQVTV-NRNESYTYNYVFDIDDSQKDLFETCV 69
            :.|..||||...:..:.|   ..|.::.:.|....|.. .:.:::..:.||.....|:::|:. :
 Frog   586 IRVLCRVRPHSHNNEEEGSLTSPITIDMNDDTRLSVFYKGKEKNFELDKVFVPQAKQEEVFQE-I 649

  Fly    70 QAKVKKLLNGYNVTILAYGQTGSGKTYTMGTAFNGVLDDHVGVIPRAVHDIFTAIAEMQSEFRFA 134
            :..|...:|||||.|.|||||||||||||    .|.| ::.|:..||:..::..:...:..:.:.
 Frog   650 EPMVMSCINGYNVCIFAYGQTGSGKTYTM----EGTL-ENPGINQRAMQALYKEMEARKGLWHYT 709

  Fly   135 VTCSFVELYQEQFYDLFSSKTRDKATVDIR-EVKNRIIMPGLTELVVTSAQQVTDHLIRGSAGRA 198
            |:.|.||:|.|...||.|...::|..:.:. :...::.:||||...|.|.:.:...|..|...||
 Frog   710 VSLSMVEIYNEVIRDLLSKDPQEKLDIKLNPDGSGQLHVPGLTSTEVNSFRHIKKLLTLGKKNRA 774

  Fly   199 VAATAMNETSSRSHAIFTLTLVATKLDGKQ----SVTTSRFNLVDLAGSERCSKTLASGDRFKEG 259
            ...|.|||.||||||:.|:     .:.||.    :|||.:.||||||||||..|:.|.|:|.||.
 Frog   775 TFCTNMNERSSRSHALLTI-----NISGKDLTTGTVTTGKLNLVDLAGSERVCKSGAEGERLKEA 834

  Fly   260 VNINKGLLALGNVINALGSGQAAGYIPYRQSKLTRLLQDSLGGNSITLMIACVSPADYNVAETLS 324
            .||||.|||||.||.||.:.|  |:||:|.||||.|||||||..:.|:|:..|||::.||.||:.
 Frog   835 QNINKSLLALGEVIQALRAKQ--GHIPFRNSKLTYLLQDSLGKGNKTVMMVQVSPSEGNVGETVC 897

  Fly   325 TLRYADRALQIKNKPVV-NLDPHAAEV 350
            :|::|.|..:::..|.. .:||.:..:
 Frog   898 SLKFAQRVCKVELGPASRRIDPGSINI 924

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klp3ANP_525053.1 KISc_KIF4 7..336 CDD:276823 131/335 (39%)
Smc <453..>985 CDD:440809
Metallothio <1071..1115 CDD:395080
kifc2XP_002941548.2 SMC_prok_B 230..>535 CDD:274008
KISc_C_terminal 583..910 CDD:276817 131/336 (39%)
Blue background indicates that the domain is not in the aligned region.

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