DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha36-3 and VMA8

DIOPT Version :9

Sequence 1:NP_001284828.1 Gene:Vha36-3 / 31235 FlyBaseID:FBgn0040377 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_010863.1 Gene:VMA8 / 856659 SGDID:S000000777 Length:256 Species:Saccharomyces cerevisiae


Alignment Length:256 Identity:128/256 - (50%)
Similarity:174/256 - (67%) Gaps:14/256 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DRLPIFPSRGAQTLMKSRLAGATKGHGLLKKKADALQMRFRLILGKIIETKTLMGQVMKEAAFSL 69
            :|..:||:|....|||::|.||.:|:.|||:|::||..|||.|..:|.:.|..||:||:.|||||
Yeast     4 NREQVFPTRMTLGLMKTKLKGANQGYSLLKRKSEALTKRFRDITKRIDDAKQKMGRVMQTAAFSL 68

  Fly    70 AEVKFTTGD-INQIVLQNVTKAQIKIRTKKDNVAGVTLPIFEPYTD-GVDTYELAGLARGGQQLA 132
            |||.:.||: |...|.::|:.|:.|:|.:::||:||.|..||.|.| .::.:.|.||.|||||:.
Yeast    69 AEVSYATGENIGYQVQESVSTARFKVRARQENVSGVYLSQFESYIDPEINDFRLTGLGRGGQQVQ 133

  Fly   133 KLKKNYQSAVRLLVQLASLQTSFVTLDDVIKVTNRRVNAIEHVIIPRINRTIEYIISELDELERE 197
            :.|:.|..||..||:||||||:|:.||:|||||||||||||||||||...||.||.||||||:||
Yeast   134 RAKEIYSRAVETLVELASLQTAFIILDEVIKVTNRRVNAIEHVIIPRTENTIAYINSELDELDRE 198

  Fly   198 EFYRLKKIQDKKREARKASDKLRAEQRLLGQMAEAQEVQNILDE---------DGDEDLLF 249
            |||||||:|:||   :..:.||.||.:|....||....:...||         |.::|::|
Yeast   199 EFYRLKKVQEKK---QNETAKLDAEMKLKRDRAEQDASEVAADEEPQGETLVADQEDDVIF 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha36-3NP_001284828.1 ATP-synt_D 17..206 CDD:280060 109/190 (57%)
VMA8NP_010863.1 V_ATPase_subD 5..213 CDD:129409 116/210 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346429
Domainoid 1 1.000 206 1.000 Domainoid score I528
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 225 1.000 Inparanoid score I753
Isobase 1 0.950 - 0 Normalized mean entropy S324
OMA 1 1.010 - - QHG60833
OrthoFinder 1 1.000 - - FOG0003389
OrthoInspector 1 1.000 - - otm46687
orthoMCL 1 0.900 - - OOG6_101069
Panther 1 1.100 - - O PTHR11671
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1631
SonicParanoid 1 1.000 - - X2286
TreeFam 00.000 Not matched by this tool.
1312.880

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