DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha36-3 and atp6v1d

DIOPT Version :10

Sequence 1:NP_570008.1 Gene:Vha36-3 / 31235 FlyBaseID:FBgn0040377 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_001017075.1 Gene:atp6v1d / 549829 XenbaseID:XB-GENE-973447 Length:247 Species:Xenopus tropicalis


Alignment Length:249 Identity:168/249 - (67%)
Similarity:202/249 - (81%) Gaps:3/249 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAAKDRLPIFPSRGAQTLMKSRLAGATKGHGLLKKKADALQMRFRLILGKIIETKTLMGQVMKEA 65
            |:.|||:.:||||.|||:||:||.||..|..|||||:|||.||||.||.||||||.|||:||:||
 Frog     1 MSGKDRIEVFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTMRFRQILKKIIETKMLMGEVMREA 65

  Fly    66 AFSLAEVKFTTGDINQIVLQNVTKAQIKIRTKKDNVAGVTLPIFEPYTDGVDTYELAGLARGGQQ 130
            ||||||.|||.||.:..|:|||.|||:|:|.|:|||||||||:||.|.:|.|:|||.||||||:|
 Frog    66 AFSLAEAKFTAGDFSTTVIQNVNKAQVKVRAKRDNVAGVTLPVFEHYQEGGDSYELTGLARGGEQ 130

  Fly   131 LAKLKKNYQSAVRLLVQLASLQTSFVTLDDVIKVTNRRVNAIEHVIIPRINRTIEYIISELDELE 195
            |||||:||..||.|||:||||||||||||:.||:||||||||||||||:|.||:.||::||||.|
 Frog   131 LAKLKRNYAKAVELLVELASLQTSFVTLDEAIKITNRRVNAIEHVIIPKIERTLSYIVTELDERE 195

  Fly   196 REEFYRLKKIQDKKREARKASDKLRAEQRLLGQMAEAQEVQNILDEDGDEDLLF 249
            |||||||||||:||:..|:.::|   ||....:::...|..|:|.||.||||||
 Frog   196 REEFYRLKKIQEKKKIIREKAEK---EQAKWKKVSGGAEPANLLAEDRDEDLLF 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha36-3NP_570008.1 ATP-synt_D 15..207 CDD:460343 142/191 (74%)
atp6v1dNP_001017075.1 ATP-synt_D 15..202 CDD:460343 137/186 (74%)

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