DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha36-3 and atp6v1d

DIOPT Version :9

Sequence 1:NP_001284828.1 Gene:Vha36-3 / 31235 FlyBaseID:FBgn0040377 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_001017075.1 Gene:atp6v1d / 549829 XenbaseID:XB-GENE-973447 Length:247 Species:Xenopus tropicalis


Alignment Length:249 Identity:168/249 - (67%)
Similarity:202/249 - (81%) Gaps:3/249 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAAKDRLPIFPSRGAQTLMKSRLAGATKGHGLLKKKADALQMRFRLILGKIIETKTLMGQVMKEA 65
            |:.|||:.:||||.|||:||:||.||..|..|||||:|||.||||.||.||||||.|||:||:||
 Frog     1 MSGKDRIEVFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTMRFRQILKKIIETKMLMGEVMREA 65

  Fly    66 AFSLAEVKFTTGDINQIVLQNVTKAQIKIRTKKDNVAGVTLPIFEPYTDGVDTYELAGLARGGQQ 130
            ||||||.|||.||.:..|:|||.|||:|:|.|:|||||||||:||.|.:|.|:|||.||||||:|
 Frog    66 AFSLAEAKFTAGDFSTTVIQNVNKAQVKVRAKRDNVAGVTLPVFEHYQEGGDSYELTGLARGGEQ 130

  Fly   131 LAKLKKNYQSAVRLLVQLASLQTSFVTLDDVIKVTNRRVNAIEHVIIPRINRTIEYIISELDELE 195
            |||||:||..||.|||:||||||||||||:.||:||||||||||||||:|.||:.||::||||.|
 Frog   131 LAKLKRNYAKAVELLVELASLQTSFVTLDEAIKITNRRVNAIEHVIIPKIERTLSYIVTELDERE 195

  Fly   196 REEFYRLKKIQDKKREARKASDKLRAEQRLLGQMAEAQEVQNILDEDGDEDLLF 249
            |||||||||||:||:..|:.::|   ||....:::...|..|:|.||.||||||
 Frog   196 REEFYRLKKIQEKKKIIREKAEK---EQAKWKKVSGGAEPANLLAEDRDEDLLF 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha36-3NP_001284828.1 ATP-synt_D 17..206 CDD:280060 139/188 (74%)
atp6v1dNP_001017075.1 ATP-synt_D 17..202 CDD:376621 135/184 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 294 1.000 Domainoid score I1476
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 334 1.000 Inparanoid score I2370
OMA 1 1.010 - - QHG60833
OrthoDB 1 1.010 - - D1313938at2759
OrthoFinder 1 1.000 - - FOG0003389
OrthoInspector 1 1.000 - - otm48055
Panther 1 1.100 - - O PTHR11671
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1631
SonicParanoid 1 1.000 - - X2286
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.110

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