DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha36-3 and Vha36-1

DIOPT Version :9

Sequence 1:NP_001284828.1 Gene:Vha36-3 / 31235 FlyBaseID:FBgn0040377 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_651987.1 Gene:Vha36-1 / 44702 FlyBaseID:FBgn0022097 Length:246 Species:Drosophila melanogaster


Alignment Length:249 Identity:209/249 - (83%)
Similarity:227/249 - (91%) Gaps:3/249 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAAKDRLPIFPSRGAQTLMKSRLAGATKGHGLLKKKADALQMRFRLILGKIIETKTLMGQVMKEA 65
            |:.|||||||||||||.|||:|||||.||||||||||||||||||||||||||||||||.|||||
  Fly     1 MSGKDRLPIFPSRGAQMLMKARLAGAQKGHGLLKKKADALQMRFRLILGKIIETKTLMGDVMKEA 65

  Fly    66 AFSLAEVKFTTGDINQIVLQNVTKAQIKIRTKKDNVAGVTLPIFEPYTDGVDTYELAGLARGGQQ 130
            ||||||.|||:|||||:|||||||||||||||||||||||||:||.|.||.||||||||||||||
  Fly    66 AFSLAEAKFTSGDINQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDGSDTYELAGLARGGQQ 130

  Fly   131 LAKLKKNYQSAVRLLVQLASLQTSFVTLDDVIKVTNRRVNAIEHVIIPRINRTIEYIISELDELE 195
            ||||||||||||:|||:||||||||||||:|||:||||||||||||||||:||:.||||||||||
  Fly   131 LAKLKKNYQSAVKLLVELASLQTSFVTLDEVIKITNRRVNAIEHVIIPRIDRTLAYIISELDELE 195

  Fly   196 REEFYRLKKIQDKKREARKASDKLRAEQRLLGQMAEAQEVQNILDEDGDEDLLF 249
            ||||||||||||||||||..:|..:||  ||.|..:.::..||||| ||:|:||
  Fly   196 REEFYRLKKIQDKKREARIKADAKKAE--LLQQGIDVRQQANILDE-GDDDVLF 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha36-3NP_001284828.1 ATP-synt_D 17..206 CDD:280060 170/188 (90%)
Vha36-1NP_651987.1 ATP-synt_D 17..207 CDD:396399 171/189 (90%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45470074
Domainoid 1 1.000 217 1.000 Domainoid score I740
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 230 1.000 Inparanoid score I1145
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1313938at2759
OrthoFinder 1 1.000 - - FOG0003389
OrthoInspector 1 1.000 - - otm26092
orthoMCL 1 0.900 - - OOG6_101069
Panther 1 1.100 - - P PTHR11671
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1631
SonicParanoid 1 1.000 - - X2286
1110.930

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