DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdfr and ADGRE3

DIOPT Version :10

Sequence 1:NP_001245501.1 Gene:Pdfr / 31234 FlyBaseID:FBgn0260753 Length:738 Species:Drosophila melanogaster
Sequence 2:NP_115960.2 Gene:ADGRE3 / 84658 HGNCID:23647 Length:652 Species:Homo sapiens


Alignment Length:343 Identity:81/343 - (23%)
Similarity:139/343 - (40%) Gaps:67/343 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   290 LMQQMGSKDFDAYIDIARRTRTLEIVGLCLSLFALIVSLLIFCTFRSLRNNRTKIHKNLFVAMVL 354
            ::..:.|::.|..:.:      :..|||.:||..|:::.|.|...:::||..|.:|..|.:.:.|
Human   343 VLMALTSQEEDPVLTV------ITYVGLSVSLLCLLLAALTFLLCKAIRNTSTSLHLQLSLCLFL 401

  Fly   355 QVIIRLTLYLDQFRRGNKEAATNTSLSVIENTP-YLCEASYVLLEYARTAMFMWMFIEGLYLH-- 416
            ..::.|                   :.:....| .||......|.|...|.|.||.:||::|.  
Human   402 AHLLFL-------------------VGIDRTEPKVLCSIIAGALHYLYLAAFTWMLLEGVHLFLT 447

  Fly   417 -NMVTVAVFQG--------SFPLKFFSRLGWCVPILMTTVWARCTVMYMDTSLGECLWNYNLTPY 472
             ..:||..:..        .||      :|:.||.:...:.| .:..::..:...| |.:....:
Human   448 ARNLTVVNYSSINRLMKWIMFP------VGYGVPAVTVAISA-ASWPHLYGTADRC-WLHLDQGF 504

  Fly   473 YWILEGPRLAVILLNFCFLVNIIRVLVMKLR--QSQASDIEQTRKAVRAAIVLLPLLGIT---NL 532
            .|...||..|:...|....:.:..:|..||.  .|:.|.|:.||.....|...|.:||.|   .|
Human   505 MWSFLGPVCAIFSANLVLFILVFWILKRKLSSLNSEVSTIQNTRMLAFKATAQLFILGCTWCLGL 569

  Fly   533 LHQLAPLKTATNFAVWSYGTHFLTSFQGFFIALIYCFLNGEVR-------AVLLKSLATQ----L 586
            | |:.|..     .|.:|....:.|.|||||.|:||.|:.:|:       ..::||.:..    |
Human   570 L-QVGPAA-----QVMAYLFTIINSLQGFFIFLVYCLLSQQVQKQYQKWFREIVKSKSESETYTL 628

  Fly   587 SVRGHPEWAPKRASMYSG 604
            |.:..|:..|....::.|
Human   629 SSKMGPDSKPSEGDVFPG 646

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
PdfrNP_001245501.1 HRM 213..272 CDD:397086
7tmB1_PDFR 306..584 CDD:320389 74/301 (25%)
TM helix 1 308..333 CDD:320389 8/24 (33%)
TM helix 2 342..364 CDD:320389 5/21 (24%)
TM helix 3 391..418 CDD:320389 9/29 (31%)
TM helix 4 430..450 CDD:320389 3/19 (16%)
TM helix 5 469..498 CDD:320389 5/28 (18%)
TM helix 6 512..539 CDD:320389 10/29 (34%)
TM helix 7 546..571 CDD:320389 11/24 (46%)
ADGRE3NP_115960.2 EGF_CA 67..104 CDD:238011