DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdfr and vipr2

DIOPT Version :9

Sequence 1:NP_001245501.1 Gene:Pdfr / 31234 FlyBaseID:FBgn0260753 Length:738 Species:Drosophila melanogaster
Sequence 2:NP_571854.1 Gene:vipr2 / 81886 ZFINID:ZDB-GENE-010406-4 Length:439 Species:Danio rerio


Alignment Length:411 Identity:118/411 - (28%)
Similarity:171/411 - (41%) Gaps:84/411 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   216 CNWTWDTLLCWPPTPAGVLARMNCPGGFHGVDTRKFAIRKCELDGRWGSRPNATEVNPPGWTDYG 280
            |...||...||.....|.:...|||.....:.||...|          ||...||    ||::..
Zfish    53 CRGMWDNFSCWHHADVGKVVVNNCPAALKNLFTRDGII----------SRNCTTE----GWSNVY 103

  Fly   281 P-----CYKPEIIRLMQQMGSKDFDAYIDIARRTRTLEIVGLCLSLFALIVSLLIFCTFRSLRNN 340
            |     |:.|.         :.:...|: .....:||..:|..|||.|||....|.|.||.|...
Zfish   104 PSIDSVCFAPT---------NTNTTMYV-FYTVMKTLYTLGHSLSLIALITGSTILCLFRKLHCT 158

  Fly   341 RTKIHKNLFVAMVLQVIIRLTLYLDQFRRGNKEAATNTSLSVIENTPYLCEASYVLLEYARTAMF 405
            |..||.|||.:.:|:.|..|......|...|.|.....||..       |:.|.|:|.|...|.|
Zfish   159 RNYIHLNLFFSFILRAIAVLVKDAILFSHENGECTVQPSLMG-------CKVSLVILNYFIMANF 216

  Fly   406 MWMFIEGLYLHNMVTVAVFQGSFPLKFFSRLGWCVPILMTTVWARCTVMYMDTSLGECLWNYNLT 470
            .|:.:||||||.::.| :|..:.....:..:||..|.:....|..|.:...||...|.:.|    
Zfish   217 YWLLVEGLYLHTLLMV-IFSENRHFIIYLLIGWGFPTVFVIPWIVCRIYLEDTGCWERIDN---- 276

  Fly   471 PYYW-ILEGPRLAVILLNFCFLVNIIRVLVMKLR--QSQASDIEQTRKAVRAAIVLLPLLGITNL 532
            |..| ::..|.:|.::|||...::|||:||.|||  ....:|..|.|:..::.::|:||.|:   
Zfish   277 PIPWRVINWPIMASVILNFILFISIIRILVQKLRCPDVGGNDQSQYRRLAKSTLLLIPLFGV--- 338

  Fly   533 LHQLAPLKTATNFAVW-----------SYGTHF---LTSFQGFFIALIYCFLNGEVRAVLLKSLA 583
                       ::.|:           :|...|   |.||||..:|::|||||.||::.|.:   
Zfish   339 -----------HYIVFVYIIDGNGERENYKIFFDLGLGSFQGLVVAILYCFLNSEVQSELKR--- 389

  Fly   584 TQLSVRGHPEWAPKRASMYSG 604
                     :|...|...|.|
Zfish   390 ---------KWRSLRLKRYIG 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdfrNP_001245501.1 HRM 213..272 CDD:280888 16/55 (29%)
7tm_4 306..563 CDD:304433 83/273 (30%)
vipr2NP_571854.1 HRM 50..110 CDD:280888 19/70 (27%)
7tm_2 124..372 CDD:278432 83/273 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4564
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D290902at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45620
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.920

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