DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdfr and Crhr2

DIOPT Version :9

Sequence 1:NP_001245501.1 Gene:Pdfr / 31234 FlyBaseID:FBgn0260753 Length:738 Species:Drosophila melanogaster
Sequence 2:XP_006236618.1 Gene:Crhr2 / 64680 RGDID:70547 Length:431 Species:Rattus norvegicus


Alignment Length:468 Identity:146/468 - (31%)
Similarity:209/468 - (44%) Gaps:72/468 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 AQLALEPTVMDALPDSDTEQVLGNLNSSAPWNLTLASAAATNFENCSALFVNYTLPQTGLYCNWT 219
            |||.|  .:...||.....|....|.....|.|.......|...|.|..:         .|||.|
  Rat    10 AQLLL--CLYSLLPLLQVAQPGQALQDQPLWTLLEQYCHRTTTRNFSGPY---------SYCNTT 63

  Fly   220 WDTL-LCWPPTPAGVLARMNCPGGFHGV--DTRKFAIRKCELDGRWGSRPNATEVNPPGWTDYGP 281
            .|.: .|||.:..|.|....||..|:|:  :|.:.|.|:|..:|.|.||.|.:...|        
  Rat    64 LDQIGTCWPQSAPGALVERPCPEYFNGIKYNTTRNAYRECLENGTWASRVNYSHCEP-------- 120

  Fly   282 CYKPEIIRLMQQMGSKDFDAYIDIARRTRTLEIVGLCLSLFALIVSLLIFCTFRSLRNNRTKIHK 346
                 |:...|    :.:|.:..||   ..:..:|.|:|:.||:.:.|:|...||:|..|..||.
  Rat   121 -----ILDDKQ----RKYDLHYRIA---LIINYLGHCVSVVALVAAFLLFLVLRSIRCLRNVIHW 173

  Fly   347 NLFVAMVLQVIIRLTLYLDQFRRGNKEAATNTSLSVIENTPYLCEASYVLLEYARTAMFMWMFIE 411
            ||....:|:   .:|.:|.|.          ....|.|.....|.....:..|.....|.|||:|
  Rat   174 NLITTFILR---NITWFLLQL----------IDHEVHEGNEVWCRCVTTIFNYFVVTNFFWMFVE 225

  Fly   412 GLYLHNMVTVAVFQGSFPLKFFSRLGWCVPILMTTVWARCTVMYMDTSLGECLWNY---NLTPYY 473
            |.|||..:.:...........|..:|||:|..:...||...:.|.:.   :|.:..   :|..| 
  Rat   226 GCYLHTAIVMTYSTEHLRKWLFLFIGWCIPCPIIVAWAVGKLYYENE---QCWFGKEPGDLVDY- 286

  Fly   474 WILEGPRLAVILLNFCFLVNIIRVLVMKLRQSQASDIEQTRKAVRAAIVLLPLLGITNLLHQLAP 538
             |.:||.:.|:|:||.||.||:|:|:.|||.|..|:..|.||||:|.:|||||||||.:|..:.|
  Rat   287 -IYQGPIILVLLINFVFLFNIVRILMTKLRASTTSETIQYRKAVKATLVLLPLLGITYMLFFVNP 350

  Fly   539 LKTATNFAVWSYGTHFLTSFQGFFIALIYCFLNGEVRAVLLK-------------SLATQLSVRG 590
            .:...:..|:.|...||.||||||:::.|||.|||||:.|.|             .:|..:|:  
  Rat   351 GEDDLSQIVFIYFNSFLQSFQGFFVSVFYCFFNGEVRSALRKRWHRWQDHHALRVPVARAMSI-- 413

  Fly   591 HPEWAPKRASMYS 603
              ..:|.|.|.:|
  Rat   414 --PTSPTRISFHS 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdfrNP_001245501.1 HRM 213..272 CDD:280888 23/61 (38%)
7tm_4 306..563 CDD:304433 88/259 (34%)
Crhr2XP_006236618.1 HormR 56..127 CDD:214468 26/96 (27%)
7tm_2 133..375 CDD:278432 89/262 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4564
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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