DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdfr and Crhr1

DIOPT Version :9

Sequence 1:NP_001245501.1 Gene:Pdfr / 31234 FlyBaseID:FBgn0260753 Length:738 Species:Drosophila melanogaster
Sequence 2:NP_112261.1 Gene:Crhr1 / 58959 RGDID:61276 Length:415 Species:Rattus norvegicus


Alignment Length:475 Identity:151/475 - (31%)
Similarity:214/475 - (45%) Gaps:98/475 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 LALEPTVMDALPDSDTEQVLGNLNSSAPWNLTLASAAATNFENCSALFVNYTLPQTGLYCNWTWD 221
            |.|.| |..:|.|...|            ||:|.|       |.|           ||.||.:.|
  Rat    16 LGLNP-VSTSLQDQRCE------------NLSLTS-------NVS-----------GLQCNASVD 49

  Fly   222 TL-LCWPPTPAGVLARMNCPGGFHGV--DTRKFAIRKCELDGRWGSRPNATEVNPPGWTDYGPCY 283
            .: .|||.:|||.|....||..|:||  :|.....|:|..:|.|.:|.|           |..| 
  Rat    50 LIGTCWPRSPAGQLVVRPCPAFFYGVRYNTTNNGYRECLANGSWAARVN-----------YSEC- 102

  Fly   284 KPEIIRLMQQMGSKDFDAYIDIARRTRTLEIVGLCLSLFALIVSLLIFCTFRSLRNNRTKIHKNL 348
             .||  |.::..||   .:..:|   ..:..:|.|:||.||:|:.::|...||:|..|..||.||
  Rat   103 -QEI--LNEEKKSK---VHYHVA---VIINYLGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNL 158

  Fly   349 FVAMVLQ----VIIRLTLYLDQFRRGNKEAATNTSLSVIENTPYLCEASYVLLEYARTAMFMWMF 409
            ..|.:|:    .:::||:                |..|.::....|........|.....|.|||
  Rat   159 ISAFILRNATWFVVQLTV----------------SPEVHQSNVAWCRLVTAAYNYFHVTNFFWMF 207

  Fly   410 IEGLYLHNMVTVAVFQGSFPLKFFSRLGWCVPILMTTVWARCTVMYMDTSLGECLWNYNLTPYY- 473
            .||.|||..:.:...........|..:||.||..:...||...:.|.:    |..|.......| 
  Rat   208 GEGCYLHTAIVLTYSTDRLRKWMFVCIGWGVPFPIIVAWAIGKLHYDN----EKCWFGKRPGVYT 268

  Fly   474 -WILEGPRLAVILLNFCFLVNIIRVLVMKLRQSQASDIEQTRKAVRAAIVLLPLLGITNLLHQLA 537
             :|.:||.:.|:|:||.||.||:|:|:.|||.|..|:..|.||||:|.:|||||||||.:|..:.
  Rat   269 DYIYQGPMILVLLINFIFLFNIVRILMTKLRASTTSETIQYRKAVKATLVLLPLLGITYMLFFVN 333

  Fly   538 PLKTATNFAVWSYGTHFLTSFQGFFIALIYCFLNGEVRAVLLK-------------SLATQLSVR 589
            |.:...:..|:.|...||.||||||:::.|||||.|||:.:.|             .:|..:|: 
  Rat   334 PGEDEVSRVVFIYFNSFLESFQGFFVSVFYCFLNSEVRSAIRKRWRRWQDKHSIRARVARAMSI- 397

  Fly   590 GHPEWAPKRASMYSGAYNTA 609
               ..:|.|.|.:|...:||
  Rat   398 ---PTSPTRVSFHSIKQSTA 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdfrNP_001245501.1 HRM 213..272 CDD:280888 24/61 (39%)
7tm_4 306..563 CDD:304433 89/262 (34%)
Crhr1NP_112261.1 HormR 40..111 CDD:214468 30/96 (31%)
Important for peptide agonist binding. /evidence=ECO:0000250 99..108 5/12 (42%)
7tm_2 116..359 CDD:278432 89/265 (34%)
Important for antagonist binding. /evidence=ECO:0000250 280..290 5/9 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4564
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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