DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdfr and crhr1.1

DIOPT Version :9

Sequence 1:NP_001245501.1 Gene:Pdfr / 31234 FlyBaseID:FBgn0260753 Length:738 Species:Drosophila melanogaster
Sequence 2:NP_001011042.1 Gene:crhr1.1 / 496451 XenbaseID:XB-GENE-966548 Length:503 Species:Xenopus tropicalis


Alignment Length:555 Identity:140/555 - (25%)
Similarity:222/555 - (40%) Gaps:126/555 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 LATGRVPLLHDFDASTTESPGTYVLDGVARVAQLALEPTVMDALPDSDTEQVLGNLNSSAPWNLT 188
            |.|..:....|.|...|.....|:|....|:.|.::            |.|..|.:.:::     
 Frog    15 LVTCPIKAAVDADDVITREEQIYLLSRAKRLCQTSM------------TTQATGAIRNTS----- 62

  Fly   189 LASAAATNFENCSALFVNYTLPQTGLYCNWTWDTLLCWPPTPAGVLARMNCPGGFHGVDTRKFAI 253
                                   .||.|...||.::|||......|..::||...:..:.:.||.
 Frog    63 -----------------------KGLSCPPEWDGIICWPRGSPNELVSVSCPEHIYDFNHQGFAY 104

  Fly   254 RKCELDGRWGSRPNATEVNPPG----WTDYGPCYKPEIIRLMQQMGSKDFDAYIDIARRTRTLEI 314
            |||...|.|        :..||    |.:|..|        :..:||.......::..|.|.:..
 Frog   105 RKCGQSGTW--------IQVPGLNRTWANYSEC--------LTWVGSGHRAKEKELFERLRLIYT 153

  Fly   315 VGLCLSLFALIVSLLIFCTFRSLRNNRTKIHKNLFVAMVLQ---VIIR-LTLYLDQFRRGNKEAA 375
            :|..:||.||:::|.|.|.|:.|...|..||.:||.:.:.:   :.:: ..||..:    |:.||
 Frog   154 IGYSISLAALLLALCILCYFKRLHCTRNYIHIHLFASFICRAGSIFLKDAILYSGE----NEGAA 214

  Fly   376 TNTSL--SVIENTPYL---CEASYVLLEYARTAMFMWMFIEGLYLHNMVTVAVFQGSFPLKFFSR 435
            .:..:  .:.:.|...   |:.:..|..|.......|:.:||||||:::.:|.....   .:|..
 Frog   215 LDEKIEFGLSKRTGLQWAGCKVTVTLFLYFLATNHYWILVEGLYLHSLIFMAFLSDR---NYFWA 276

  Fly   436 L---GWCVPILMTTVWARCTVMYMDTSLGECLWNYNLTPYYWILEGPRLAVILLNFCFLVNIIRV 497
            |   ||.:|.:..:|||...|...||   :| |:.:.....||.:.|.||..|:||...:||:||
 Frog   277 LIIIGWGLPAVFVSVWASVRVSLADT---QC-WDLSAGHMKWIYQTPILAATLVNFILFLNIVRV 337

  Fly   498 LVMKLRQS---QASDIEQTRKAVRAAIVLLPLLGITNLLHQLAPLKTATNFAVWSYGTH---FLT 556
            |..||.::   :....:|..|.:::.:||:||.|:..:|....|....|.. :|....|   |..
 Frog   338 LASKLWETNNRKQDPCQQYGKLLKSTLVLMPLFGVHYVLFMAIPYTEVTGL-LWQIQMHYEMFFN 401

  Fly   557 SFQGFFIALIYCFLNGEVR------------AVLLKSLATQLSVRGHPEW--------------- 594
            |.||||:|:||||.||||:            ||.||..:...|..|...:               
 Frog   402 SSQGFFVAIIYCFCNGEVQAEARKFWFRRNLAVDLKQKSRMTSTGGSCHYGGVLTHTTNSVCLSM 466

  Fly   595 ---APKRASMYSGAY------NTAPDTDAVQPAGD 620
               ..:.||:.|.|:      ||.......|..|:
 Frog   467 VARGKQMASLQSSAHLPGYISNTVTSNSTTQQLGN 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdfrNP_001245501.1 HRM 213..272 CDD:280888 18/58 (31%)
7tm_4 306..563 CDD:304433 79/274 (29%)
crhr1.1NP_001011042.1 HRM 64..129 CDD:280888 22/72 (31%)
7tm_2 145..408 CDD:278432 79/274 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D290902at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45620
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.020

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