DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdfr and CG11318

DIOPT Version :9

Sequence 1:NP_001245501.1 Gene:Pdfr / 31234 FlyBaseID:FBgn0260753 Length:738 Species:Drosophila melanogaster
Sequence 2:NP_651842.3 Gene:CG11318 / 43678 FlyBaseID:FBgn0039818 Length:802 Species:Drosophila melanogaster


Alignment Length:660 Identity:137/660 - (20%)
Similarity:223/660 - (33%) Gaps:212/660 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 GGRVRHADSLHIYYAVDGKM--------------TLLSNILDCGGCISAQRFTRLLRQSGSSGPS 101
            ||.:..|| :|:...:.|.:              ::...|:.|.        :::||.|.....:
  Fly   181 GGNLLPAD-VHMTGQMFGALMQQDKDATVSVDLVSVCKEIMSCD--------SKVLRLSAQLNAT 236

  Fly   102 PSAPTAGTFES----------------KSMLEPTSSHSLATGRVPLLHDFDASTTESPG--TYVL 148
            .|  ....|||                |.:.:|||               |.:.|.:.|  ||..
  Fly   237 NS--LLSQFESYMDALPEQLVPKDRCGKVVAKPTS---------------DEAETATTGVETYNF 284

  Fly   149 DGVARVAQLALEPTVMDALPDSDTEQVLGNLNSSAPWNLTLASAAA------------------T 195
            ..:...|.:....:|..|.|:.|  ::.|....|||.:....||:.                  :
  Fly   285 SDIGVQALITGNISVFFANPECD--RITGLAIFSAPGDQRKTSASGFWYRFIRFSEDLAKVKEES 347

  Fly   196 NFENCS--------------------------ALFVNYTLPQT-------------GLYCNWTWD 221
            |.|..:                          ||||..:|.:|             ||..|:.  
  Fly   348 NLETAAFLPENLWRQVKSRGATYLIFKVYAHDALFVETSLQRTRKPRSKVISISIPGLRSNYL-- 410

  Fly   222 TLLCWPPTPAGVLARMNCPGGFHGVDTRKFAIRK-CELDGRWGSRPNATE-VNPPGWTD------ 278
                  ..|...|.|..   .....|::.|:|.. |   |.|.....:|| |:....:|      
  Fly   411 ------SLPLPFLLRNE---NLRNPDSKAFSIGSGC---GYWNYETWSTEGVSTESSSDLLKDAI 463

  Fly   279 --------------YGPCYK-----PEIIRLMQQMGSKDFDAYIDIARRTRTLEIVGLCLSLFAL 324
                          .|..|:     .||  |:..:..|..|          .:.|||..|||..:
  Fly   464 IECHTNHLTQFAFLVGGSYRANDLGEEI--LITPINEKVLD----------IISIVGCSLSLLGI 516

  Fly   325 IVSLLIFCTFRSLRNN-RTKIHKNLFVAMVLQVIIRLTLYLDQFRRGNKEAATNTSLSVIENTPY 388
            :...|....|:|.|:. .||:..:|.:||.||:::.:.|..|..    .||.      |:.....
  Fly   517 LGIFLTAALFKSWRSQASTKVLLHLCLAMCLQMMLFVFLNTDDV----SEAL------VVNGNTV 571

  Fly   389 LCEASYVLLEYARTAMFMWMFIEG-LYLHNMVTVAVFQGSFPLKFFSR---LGWCVPILMTTVWA 449
            .|.|....::|:...:|.||.|.. |.....|||...:.  |.::..:   :.|.:|::.|.:.|
  Fly   572 RCVALGAAMQYSILVLFSWMLIIAFLQFQRYVTVIGIER--PPRYILKAAIVAWLLPLVPTLLVA 634

  Fly   450 RC-------TVMYMDTSLGECLWNYNLTPY---YWILEGPRLAVILLNFCFLVNIIRV---LVMK 501
            ..       :...:.|..|.|        |   |.::.|..|.|.|:..|.||..:.|   :...
  Fly   635 LIDPDSYVPSAAQLSTDTGIC--------YPSGYGLIFGVVLPVTLITVCNLVIFVYVFYSISHS 691

  Fly   502 LRQS-QASDIEQTRKAVRAAIVLLPLLGITNLLHQLAPLKTATNFAVWSYGTHFLTSFQGFFIAL 565
            |.|| ..::.:...|.:|.:|:|..|||:|.:....|.::....|   ||......:.|||.:.:
  Fly   692 LSQSIHKNEKKMVVKQIRLSIMLFFLLGLTWIFGIFAFMQAGVAF---SYLFCITATMQGFVMFI 753

  Fly   566 IYCFLNGEVR 575
            .:..|:...|
  Fly   754 YFVLLDSTNR 763

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdfrNP_001245501.1 HRM 213..272 CDD:280888 14/60 (23%)
7tm_4 306..563 CDD:304433 69/275 (25%)
CG11318NP_651842.3 GPS 437..475 CDD:280071 7/40 (18%)
7tm_4 500..750 CDD:304433 69/282 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462152
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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