DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdfr and Adgrg5

DIOPT Version :10

Sequence 1:NP_001245501.1 Gene:Pdfr / 31234 FlyBaseID:FBgn0260753 Length:738 Species:Drosophila melanogaster
Sequence 2:NP_001139444.1 Gene:Adgrg5 / 382045 MGIID:2685955 Length:524 Species:Mus musculus


Alignment Length:376 Identity:81/376 - (21%)
Similarity:147/376 - (39%) Gaps:102/376 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   259 DGRWGSRPNATEVNPPGWTDYGPCYKPEIIRLMQQMGSKDFDAYIDIARRTRTLEIVGLCLSLFA 323
            :|.:..:|:||:|       ...|.......::.|:......|.:.:.  ...:..||..:|:.|
Mouse   203 EGCYTEQPSATQV-------LCHCNHLTYFAVLMQLSGDP
VPAELQVP--LEYISFVGCSISIVA 258

  Fly   324 LIVSLLIFCTFRSLRNNRTKIHKNLFVAMVLQVIIRLTLYLDQFRRGNKEAATNTSLSVIENTPY 388
            .::::|::...|...::.|:||.||..:::|   :.:|..|             :|...:...|.
Mouse   259 SLLTILLYAQSRKQSDSTTRIHMNLNGSVLL---LNVTFLL-------------SSQMTLPTMPR 307

  Fly   389 -LCEASYVLLEYARTAMFMWMFIEGLYLHNMVTVAVFQGSFPLKFFSR-------LGWCVPILM- 444
             :|:....:|.||..:...||.|||..|:      :|.|.....:..|       |||..|.|: 
Mouse   308 PVCKVLAAVLHYALLSSLTWMAIEGFNLY------LFLGRVYNAYIRRYLLKLCMLGWGFPALLV 366

  Fly   445 -------TTVWARCTVMYMDTSLGECLWN---YNLTPYYWILEGPRLAVILL----NFCFLVNII 495
                   ::|:..|.     |||.:...|   :......|| ..|.:..||:    .|..|.|::
Mouse   367 LLLLMIKSSVYGPCV-----TSLSKSQENGTGFQNVSMCWI-RSPMVHSILVMGYGGFTSLFNLV 425

  Fly   496 RV-----LVMKLRQSQASDIEQTRKAVR------AAIVLLPLLGITNLLHQLAPLKTATNFAVWS 549
            .:     ::.:||..:        ||:.      .|:|    ||:|.|      |.|....|.:|
Mouse   426 VLAWALWILCRLRARE--------KALSPWAYRDTAMV----LGLTVL------LGTTWTLAFFS 472

  Fly   550 YGTHFL---------TSFQGFFIALIYC----FLNGEVRAVLLKSLATQLS 587
            :|...|         .|..|||:.|.:|    :.:.|.:|.:....::|::
Mouse   473 FGVFLLPQLFLFTIFNSLYGFFLFLWFCSQKRYSDAEAKAEMEAVSSSQMT 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdfrNP_001245501.1 HRM 213..272 CDD:397086 4/12 (33%)
7tmB1_PDFR 306..584 CDD:320389 72/324 (22%)
TM helix 1 308..333 CDD:320389 5/24 (21%)
TM helix 2 342..364 CDD:320389 7/21 (33%)
TM helix 3 391..418 CDD:320389 9/26 (35%)
TM helix 4 430..450 CDD:320389 7/34 (21%)
TM helix 5 469..498 CDD:320389 8/37 (22%)
TM helix 6 512..539 CDD:320389 8/32 (25%)
TM helix 7 546..571 CDD:320389 10/37 (27%)
Adgrg5NP_001139444.1 GPS 183..228 CDD:460350 6/31 (19%)
GPS. /evidence=ECO:0000255|PROSITE-ProRule:PRU00098 185..235 7/38 (18%)
Stachel. /evidence=ECO:0000250|UniProtKB:Q8IZF4 224..232 1/7 (14%)
7tm_GPCRs 242..514 CDD:475119 72/319 (23%)
TM helix 1 244..268 CDD:410628 5/23 (22%)
TM helix 2 277..298 CDD:410628 8/36 (22%)
TM helix 3 311..333 CDD:410628 7/21 (33%)
TM helix 4 353..369 CDD:410628 5/15 (33%)
TM helix 5 405..428 CDD:410628 6/22 (27%)
TM helix 6 452..474 CDD:410628 10/31 (32%)
TM helix 7 478..503 CDD:410628 7/24 (29%)

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