DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdfr and mthl9

DIOPT Version :9

Sequence 1:NP_001245501.1 Gene:Pdfr / 31234 FlyBaseID:FBgn0260753 Length:738 Species:Drosophila melanogaster
Sequence 2:NP_612029.1 Gene:mthl9 / 38056 FlyBaseID:FBgn0035131 Length:513 Species:Drosophila melanogaster


Alignment Length:522 Identity:92/522 - (17%)
Similarity:145/522 - (27%) Gaps:244/522 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 VLDGV-------ARVAQLALEPTVMDALPDSDTEQVLGNLNSSAP-WNLTLASAA--ATNFENCS 201
            |:|||       .|.....|:|.:....|:        ||...|. ||.|:....  :|:.|   
  Fly    67 VIDGVEYRAKKHLRGCVCLLKPCISFCCPE--------NLVFDAKHWNCTMPHQVRESTHVE--- 120

  Fly   202 ALFVNYTLPQ----------TGLYCN-----------WTWDTLLCWPPTPAGVLARMNCPGGFHG 245
            ..:.|.|:.|          |.|.|.           |.||..      ..|.|.|         
  Fly   121 LTYANRTVDQVRIRDRFVVRTELGCRNKFVDKKHDNFWQWDLF------ENGTLRR--------- 170

  Fly   246 VDTRKFAIRKCELDGR-WGSRP---NATEVNPPGWTDYGPCYKPEIIRLMQQMGSKDFDAYIDIA 306
                         |.| |.:..   :..|.||..|         |:..|..:.....:..:    
  Fly   171 -------------DNRLWSTDEYCFSPLEHNPEQW---------ELTPLNCERFQTGYRVW---- 209

  Fly   307 RRTRTLEIVGLCLSLFALIVSLLIFCTFRSLRNNRTKIHKNLFVAMVLQVIIRLTLYLDQFRRGN 371
                   |..:| |:.|:|:::.|.....|:|:.|...:..|.:..:|.:|:             
  Fly   210 -------IYAIC-SIIAIIINIFILSLLGSVRDARKSHYGQLIIYYLLSMIV------------- 253

  Fly   372 KEAATNTSLSVIENTPYLCEASYVLLEYARTAMFMWMFIEGLYLHNMVTVAVFQGSFPLKFFSRL 436
                                 .|.||.|             |.|.|                   
  Fly   254 ---------------------GYSLLVY-------------LALKN------------------- 265

  Fly   437 GWCVPILMTTVWARCTVMYMDTSLGECLWNYNLTPYYWILEGPRLAVILLNFCFLVNIIRVLVMK 501
                |:.::.|..|               |.....|:         .|:|:|.||.......::|
  Fly   266 ----PMKLSHVACR---------------NIGFLAYF---------CIMLSFVFLAICSLDFLLK 302

  Fly   502 LRQSQASDIEQTRKAVRA-------AIVLLPLLGITNLLHQLAPLKTATNFA-----------VW 548
            .:|          ||||:       |:.:|.::|:..|:......|...:|.           |.
  Fly   303 FKQ----------KAVRSSVRRLSLALAVLAVIGLRFLVSLAQDSKLPKHFKPGMGEDYCWFDVR 357

  Fly   549 SYGTHFLTSFQGFFIALIYCFLNGEVRAVLLKSLATQLSVRGHPEWAPKRASMYSGAYNTAPDTD 613
            ::|            .|||.:  |.:..:|:.|:...|..             |...|...|||.
  Fly   358 TWG------------ILIYYY--GPIALLLIFSIVCCLKA-------------YFSIYELPPDTQ 395

  Fly   614 AV 615
            .:
  Fly   396 YI 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdfrNP_001245501.1 HRM 213..272 CDD:280888 12/73 (16%)
7tm_4 306..563 CDD:304433 43/274 (16%)
mthl9NP_612029.1 Methuselah_N 29..199 CDD:284145 37/179 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462200
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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