DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdfr and Dh44-R1

DIOPT Version :9

Sequence 1:NP_001245501.1 Gene:Pdfr / 31234 FlyBaseID:FBgn0260753 Length:738 Species:Drosophila melanogaster
Sequence 2:NP_610960.1 Gene:Dh44-R1 / 36601 FlyBaseID:FBgn0033932 Length:504 Species:Drosophila melanogaster


Alignment Length:482 Identity:139/482 - (28%)
Similarity:212/482 - (43%) Gaps:79/482 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   215 YCNWTWDTLLCWPPTPAGVLARMNCPGGFHGV--DTRKFAIRKCELDGRWGSRPNATEVNPPGWT 277
            :|...:|::||||.|..|.||.:.|.....|:  |:.|.|.|.|..:|.|..           :|
  Fly    52 HCLTQFDSILCWPRTARGTLAVLQCMDELQGIHYDSSKNATRFCHANGTWEK-----------YT 105

  Fly   278 DYGPCY---KPEIIRLMQQMGSKDFDAYIDIARRTRTLEIVGLCLSLFALIVSLLIFCTFRSLRN 339
            :|..|.   .||.:        .:|:..:::   ...:..:|..|||.:|.::|::|..|:.||.
  Fly   106 NYDACAHLPAPESV--------PEFEVIVEL---PTIIYYIGYTLSLVSLSLALIVFAYFKELRC 159

  Fly   340 NRTKIHKNLFVAMVLQVIIRLTLYLDQFRRGNKEAATNTSLSV---IENTPYLCEASYVLLEYAR 401
            .|..||.|||...::..:..:.|                 |||   |.:....|.|...|..:..
  Fly   160 LRNTIHANLFFTYIMSALFWILL-----------------LSVQISIRSGVGSCIALITLFHFFT 207

  Fly   402 TAMFMWMFIEGLYLHNMVTVAVFQGSFPLKF--FSRLGWCVPILMTTVWA---RCTVMYMDTSLG 461
            ...|.||.:|||||: |:.|..|.|. .|:|  ::.:||..|.|....||   ..||.|......
  Fly   208 LTNFFWMLVEGLYLY-MLVVKTFSGD-NLRFNIYASIGWGGPALFVVTWAVAKSLTVTYSTPEKY 270

  Fly   462 E--CLWNYNLTPYYWILEGPRLAVILLNFCFLVNIIRVLVMKLRQSQASDIEQTRKAVRAAIVLL 524
            |  |.|... |...||.:||..||:::|..||:.|:.||:.|||.:...:..|.|||.:|.:||:
  Fly   271 EINCPWMQE-THVDWIYQGPVCAVLIINLTFLLRIMWVLITKLRSANTVETRQYRKAAKALLVLI 334

  Fly   525 PLLGITNLLHQLAPLKTATNFAVWSYGTHFLTSFQGFFIALIYCFLNGEVRAVLLKSLAT----- 584
            ||.|||.|:....|.::.....:::.....|.|.|||.::|.|||||.|||..|...::|     
  Fly   335 PLFGITYLVVLAGPSESGLMGHMFAVLRAVLLSTQGFSVSLFYCFLNSEVRNALRHHISTWRDTR 399

  Fly   585 QLSVRGHPEWAPKRASMYSGAYNTAPDTDAVQPAGDPSATGKRISPPNKRLNGRKPSSASIVMIH 649
            .:.:..:..:..|..|...|    :|..::::|.......|||.|..:      ..::.::|..|
  Fly   400 TIQLNQNRRYTTKSFSKGGG----SPRAESMRPLTSYYGRGKRESCVS------SATTTTLVGQH 454

  Fly   650 EPQQRQR-------LMPRLQNKAREKG 669
            .|....|       .||.|...|...|
  Fly   455 APLSLHRGSNNALHTMPTLAANAMSSG 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdfrNP_001245501.1 HRM 213..272 CDD:280888 19/58 (33%)
7tm_4 306..563 CDD:304433 85/266 (32%)
Dh44-R1NP_610960.1 HRM 52..112 CDD:397086 22/70 (31%)
7tmB1_DH_R 126..394 CDD:320391 95/290 (33%)
TM helix 1 129..153 CDD:320391 7/23 (30%)
TM helix 2 162..183 CDD:320391 6/37 (16%)
TM helix 3 197..219 CDD:320391 6/21 (29%)
TM helix 4 238..254 CDD:320391 4/15 (27%)
TM helix 5 279..302 CDD:320391 9/23 (39%)
TM helix 6 327..349 CDD:320391 9/21 (43%)
TM helix 7 356..381 CDD:320391 9/24 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462231
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4564
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D112615at6656
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45620
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2715
SonicParanoid 00.000 Not matched by this tool.
65.880

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