DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pdfr and Dh31-R

DIOPT Version :9

Sequence 1:NP_001245501.1 Gene:Pdfr / 31234 FlyBaseID:FBgn0260753 Length:738 Species:Drosophila melanogaster
Sequence 2:NP_001260951.1 Gene:Dh31-R / 36475 FlyBaseID:FBgn0052843 Length:604 Species:Drosophila melanogaster


Alignment Length:604 Identity:164/604 - (27%)
Similarity:239/604 - (39%) Gaps:130/604 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 FDASTTESPGTYVLDGVARVAQLALEPTVMDALPDSDTEQVLGNLNSSAPWNLTLASAAATNFEN 199
            |..|.:.| ||    .||.:|:     :|.::.||.|                .|.:|..|.. |
  Fly    12 FSGSGSGS-GT----NVASIAE-----SVAESGPDFD----------------ALRAACETRL-N 49

  Fly   200 CSALFVNYTLP--QTGLYCNWTWDTLLCWPPTPAGVLARMNCPGGFHGVDTRKFAIRKCELDGRW 262
            .|........|  :.|.:|..|:|..||||.|..|..|...||....|.|..::|.::|.|||.|
  Fly    50 ASGQLAGSGGPGAEAGTHCAGTFDGWLCWPDTAVGTSAYELCPDFITGFDPARYAHKECGLDGEW 114

  Fly   263 GSRP--NATEVNPPGWTDYGPCYKPEIIRLMQQMGSKDFDAYIDIARR--TRTLEIVGLCLSLFA 323
            ...|  |.|      |::|..|...|                 |:..|  ...:..||...||.|
  Fly   115 FKHPLTNKT------WSNYTTCVNLE-----------------DLNWRHTVNLISEVGYGTSLLA 156

  Fly   324 LIVSLLIFCTFRSLRNNRTKIHKNLFVAMVLQVIIRLTLYLDQFRRGNKEAATNTSLSVIENTPY 388
            :::||.|...|:||:..|..:|.|||.:......:.|..||  ....|.|        ::..:|.
  Fly   157 ILLSLAILGYFKSLKCARITLHMNLFASFAANNSLWLVWYL--LVMPNSE--------LLHQSPM 211

  Fly   389 LCEASYVLLEYARTAMFMWMFIEGLYLHNMVTVAVFQGSFPLKFFSRLGWCVPILMTTVWARCTV 453
            .|.|.::.|.|...:.:.||..||.|||.::..|.......:|:....||..|.::..|::    
  Fly   212 RCVALHITLHYFLLSNYSWMLCEGFYLHTVLVAAFISEKRLVKWLIAFGWGSPAIVIFVYS---- 272

  Fly   454 MYMDTSLG-------ECLWNYNLTPYYWILEGPRLAVILLNFCFLVNIIRVLVMKLR-----QSQ 506
              |...||       .| | .|.|.|..||..|....:.||..||.||:||:::||.     |..
  Fly   273 --MARGLGGTPEDNRHC-W-MNQTNYQNILMVPVCISMFLNLLFLCNIVRVVLLKLNAPASIQGS 333

  Fly   507 ASDIEQTRKAVRAAIVLLPLLGITNLLHQLAPLKTATNFAVWSYGTHFLTSFQGFFIALIYCFLN 571
            ........:|.||.::|:||||:..:|....|.........:...:.|..||||..:|:::||.|
  Fly   334 CGPSRTVLQAFRATLLLVPLLGLQYILTPFRPAPKHPWENTYEIISAFTASFQGLCVAILFCFCN 398

  Fly   572 GEVRAVLLKS---------------LATQLS-VRGHPEW------------APKRASMYSGAYNT 608
            |||.|.:.:.               .|||:| ||..|..            |.:|||  :|..:.
  Fly   399 GEVIAQMKRKWRMMCFSNRPRTNSYTATQVSFVRCGPPLPGEEKVXLKDMSAKRRAS--AGPQHH 461

  Fly   609 APDTDAVQPAGDPS-ATGKRISPPNKRLNG---RKPSSASIVMIHEPQQRQRLMPRLQNKAREKG 669
            .|...:.|.:.|.. |..:.::..:..|.|   |.|.......|...:|.|.||        |:|
  Fly   462 QPHHQSHQLSTDQQRARSQSLASSSSFLEGWRDRMPFLKRRQTIDHSRQSQPLM--------EEG 518

  Fly   670 KDRV--EKTDAEAEPDPTI 686
            .:.|  .|:...|...||:
  Fly   519 GETVGQAKSAPGAVDRPTL 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdfrNP_001245501.1 HRM 213..272 CDD:280888 24/60 (40%)
7tm_4 306..563 CDD:304433 77/270 (29%)
Dh31-RNP_001260951.1 HRM 65..132 CDD:280888 27/72 (38%)
7tm_4 140..390 CDD:304433 76/267 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4564
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001436
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45620
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2715
SonicParanoid 00.000 Not matched by this tool.
54.940

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