DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdfr and Nnmt

DIOPT Version :9

Sequence 1:NP_001245501.1 Gene:Pdfr / 31234 FlyBaseID:FBgn0260753 Length:738 Species:Drosophila melanogaster
Sequence 2:NP_001100289.1 Gene:Nnmt / 300691 RGDID:1309606 Length:264 Species:Rattus norvegicus


Alignment Length:88 Identity:18/88 - (20%)
Similarity:33/88 - (37%) Gaps:19/88 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   453 VMYMDTSLGECLWNYNLTPYYWIL----------EGPRLAVILLN---------FCFLVNIIRVL 498
            |:..|.|..:.|...:|.|...:|          :.|.....|.|         |..:|:.::..
  Rat   138 VLKCDVSQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSS 202

  Fly   499 VMKLRQSQASDIEQTRKAVRAAI 521
            ...:.:.:.|.:...|:|||.|:
  Rat   203 YYMIGEQKFSSLSLDREAVRDAV 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdfrNP_001245501.1 HRM 213..272 CDD:280888
7tm_4 306..563 CDD:304433 18/88 (20%)
NnmtNP_001100289.1 NNMT_PNMT_TEMT 2..259 CDD:395988 18/88 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4564
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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