DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdfr and mthl12

DIOPT Version :9

Sequence 1:NP_001245501.1 Gene:Pdfr / 31234 FlyBaseID:FBgn0260753 Length:738 Species:Drosophila melanogaster
Sequence 2:NP_731791.2 Gene:mthl12 / 261599 FlyBaseID:FBgn0045442 Length:488 Species:Drosophila melanogaster


Alignment Length:515 Identity:82/515 - (15%)
Similarity:176/515 - (34%) Gaps:141/515 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 APTAGTFESKSMLE----PTSSHSL-------------ATGRVPLLHDFDASTTESPGTYVLDGV 151
            |...|.|:.|.:::    ||...:|             ...|..:|.:.:.|          |||
  Fly    54 ANLTGEFDYKELMDGSKVPTEFPNLRGCICKVRPCIRICCARKNILSNGECS----------DGV 108

  Fly   152 ARVAQLA-LEPTVMDALPDSDTEQVLGNLNSSAPWNLTLASAAATNFENCSALFV----NYTLPQ 211
            ....:|. |:.|:.|.|.   |:..|..||....:|.|........|:.|..:..    .||:.:
  Fly   109 KNEIKLTMLDLTMQDILL---TDPTLAELNMIPQYNSTELLILREQFQPCDEIVSLKRDEYTILK 170

  Fly   212 TGLYCNWTWDTLLCWPPTPAGVLAR-MNCPGGFHGVDTRKFAIRKCELDGRWGSRPNATEVNPPG 275
            .|       ..||   .|.|.:|:. ..|                               :.|..
  Fly   171 DG-------SILL---HTSAEILSNDQYC-------------------------------LYPEI 194

  Fly   276 WTDYGPCYKPEIIRLMQQMGSKDFDAYIDIARRTRTLEIVGLCLSLFALIVSLLIFCTFRSLRNN 340
            ::|:     ||.||::.:.      .|.::......|.::    |:...|::|.::.:...||| 
  Fly   195 YSDF-----PETIRIINRR------CYRNVMPGIAQLSVI----SVVGFILTLAVYLSVEKLRN- 243

  Fly   341 RTKIHKNLFVAMVLQVIIRLTLYLDQFRRGNKEAATNTSLSVIENTPYLCEASYVLLEYARTAMF 405
              .:.|.|..::....:......:|.||             ::::   :|.|:..:..:...:.:
  Fly   244 --LLGKCLICSLFSMFMEYFIWTMDYFR-------------LLQS---ICSAAGYMKYFFSMSSY 290

  Fly   406 MWMFIEGLYLHNMVT-VAVFQGSFPLKFFSRLGWCVPILMTTVWARCTVMYMDTSLGECLW---- 465
            :|..:...:|..:.| :...:..:....::...||...:.|.|......|: :...|:..|    
  Fly   291 LWFSVVSFHLWELFTSLNRHEPQYRFLIYNTFVWCTAAIPTVVIFSMNQMW-ENDPGKSEWLPLV 354

  Fly   466 --------NYNLTPYYWILEGPRLAVILLNFCFLVNII--RVLVMKLRQSQASDIEQTRKAVRAA 520
                    ::|.:.:::    ..:.:::||...::..:  .:.:.|:::...|..:...:.....
  Fly   355 GYFGCSVKDWNSSSWFY----SHIPIVILNSFNVIMFVLTAIYIWKVKKGVKSFAQHDERNTTCL 415

  Fly   521 ----------IVLLPLLGITNLLHQLAPLKTATNFAVWSYGTHFLTSFQGFFIALIYCFL 570
                      :.|..::|.:.||.||..|...::..:.:...:........|..||:..|
  Fly   416 EFNVQTYIQFVRLFLIMGASWLLDQLTRLAEDSHLLLDTIVLNLTVYLNAAFGILIFVLL 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdfrNP_001245501.1 HRM 213..272 CDD:280888 7/59 (12%)
7tm_4 306..563 CDD:304433 36/281 (13%)
mthl12NP_731791.2 Methuselah_N 27..209 CDD:284145 41/219 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462249
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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