DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pdfr and Adcyap1r1

DIOPT Version :9

Sequence 1:NP_001245501.1 Gene:Pdfr / 31234 FlyBaseID:FBgn0260753 Length:738 Species:Drosophila melanogaster
Sequence 2:NP_001257508.1 Gene:Adcyap1r1 / 24167 RGDID:2038 Length:523 Species:Rattus norvegicus


Alignment Length:560 Identity:134/560 - (23%)
Similarity:212/560 - (37%) Gaps:190/560 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 VARVAQLALEPTVMDALP-----DSD----TEQV-----------LGNLNSSAPWNLTLASAAAT 195
            :|||.||:|...:   ||     .||    .||.           |..||.|:|.          
  Rat     1 MARVLQLSLTALL---LPVAIAMHSDCIFKKEQAMCLERIQRANDLMGLNESSPG---------- 52

  Fly   196 NFENCSALFVNYTLPQTGLYCNWTWDTLLCWPPTPAGVLARMNCP-------------------G 241
                                |...||.:.||.|...|.:..::||                   .
  Rat    53 --------------------CPGMWDNITCWKPAQVGEMVLVSCPEVFRIFNPDQVWMTETIGDS 97

  Fly   242 GFHGVDTRKFAI-------RKCELDGRWGSRPNATEVNPPGWTDYGPCYKPEIIRLMQQMGSKDF 299
            ||  .|:....|       |.|..|| | |.|.....:..|:.||.|           :.|.:|:
  Rat    98 GF--ADSNSLEITDMGVVGRNCTEDG-W-SEPFPHYFDACGFDDYEP-----------ESGDQDY 147

  Fly   300 DAYIDIARRTRTLEIVGLCLSLFALIVSLLIFCTFRSLRNNRTKIHKNLFVAMVLQVIIRLTLYL 364
             .|:.:    :.|..||...||..|..:::|.|.||.|...|..||.||||:.:|:.|   ::::
  Rat   148 -YYLSV----KALYTVGYSTSLATLTTAMVILCRFRKLHCTRNFIHMNLFVSFMLRAI---SVFI 204

  Fly   365 DQFRRGNKEAATNTSLSVIENTPYLCEASYVLLEYARTAMFMWMFIEGLYLHNMVTVAVFQGSFP 429
            ..:....::.:::..:|.:|     |:|..|...|...:.:.|:|||||||..::....|.....
  Rat   205 KDWILYAEQDSSHCFVSTVE-----CKAVMVFFHYCVVSNYFWLFIEGLYLFTLLVETFFPERRY 264

  Fly   430 LKFFSRLGWCVPILMTTVWARCTVMYMDTSLGECLWNYN-LTPYYWILEGPRLAVILLNFCFLVN 493
            ..:::.:||..|.:..||||...:.:.|..   | |:.| .|..:|:::||.:..|::||...:.
  Rat   265 FYWYTIIGWGTPTVCVTVWAVLRLYFDDAG---C-WDMNDSTALWWVIKGPVVGSIMVNFVLFIG 325

  Fly   494 IIRVLVMKL-------------------------------------------------------- 502
            ||.:||.||                                                        
  Rat   326 IIIILVQKLQSPDMGGNESSIYLTNLRLRVPKKTREDPLPVPSDQHSPPFLSCVQKCYCKPQRAQ 390

  Fly   503 ----RQSQASDIEQTRKAVRAAIVLLPLLGITNLLHQLAPLKTA-TNFAVWSYGTHFLTSFQGFF 562
                :.|:.|.|  |.:..|:.::|:||.||...:...:|...: ....|:..|   |.|||||.
  Rat   391 QHSCKMSELSTI--TLRLARSTLLLIPLFGIHYTVFAFSPENVSKRERLVFELG---LGSFQGFV 450

  Fly   563 IALIYCFLNGEVRAVLLKSLATQLSVRGHPEWAPKRASMY 602
            :|::||||||||:|.:.:            :|...:.:.|
  Rat   451 VAVLYCFLNGEVQAEIKR------------KWRSWKVNRY 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdfrNP_001245501.1 HRM 213..272 CDD:280888 20/84 (24%)
7tm_4 306..563 CDD:304433 78/318 (25%)
Adcyap1r1NP_001257508.1 HRM 51..136 CDD:280888 22/118 (19%)
Important for ligand binding and specificity. /evidence=ECO:0000250 124..138 2/13 (15%)
7tm_2 149..451 CDD:278432 79/322 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4564
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D290902at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45620
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.920

Return to query results.
Submit another query.