DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pdfr and ADGRF5

DIOPT Version :10

Sequence 1:NP_001245501.1 Gene:Pdfr / 31234 FlyBaseID:FBgn0260753 Length:738 Species:Drosophila melanogaster
Sequence 2:XP_005248949.1 Gene:ADGRF5 / 221395 HGNCID:19030 Length:1386 Species:Homo sapiens


Alignment Length:730 Identity:136/730 - (18%)
Similarity:234/730 - (32%) Gaps:244/730 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 EMERDQFSIAANACMSMGPML------------------ISKDKAPCSGGRVRHADSLHIYYAVD 67
            |...|..|...|:.:.|...|                  ||.|||.            |...:..
Human   755 EKRNDCISAPINSLLQMAKALIKSPSQDEMLPTYLKDLSISIDKAE------------HEISSSP 807

  Fly    68 GKMTLLSNILDCGGCISAQRFTRLLRQSGSSGPSPSAPTAGTFESKSMLEPTSSHSLATGRVPLL 132
            |.:..:.||||....:..|                       ..|:.|....|:.::..|: |:|
Human   808 GSLGAIINILDLLSTVPTQ-----------------------VNSEMMTHVLSTVNVILGK-PVL 848

  Fly   133 HDFDASTTE--SPGTYVLDGVARVAQLALEPTVMDALPDSDTEQVLGN--LNSSAP--------- 184
            :.:.....:  :..:.:|..|.|.:| ||:......|..|.|...:.:  :.||.|         
Human   849 NTWKVLQQQWTNQSSQLLHSVERFSQ-ALQSGDSPPLSFSQTNVQMSSMVIKSSHPETYQQRFVF 912

  Fly   185 -----W-NLTLASAAATNFENCSAL--------------------FVNYTLPQTGLYCNWTWDTL 223
                 | |:.:..:...|.::.|::                    |....:..|.:..|.|.   
Human   913 PYFDLWGNVVIDKSYLENLQSDSSIVTMAFPTLQAILAQDIQENNFAESLVMTTTVSHNTTM--- 974

  Fly   224 LCWPPTPAGVLARMNCPGGFHGVDTRKFAIRKCELDGRWGSRPNATEVNPPGWTDYGPCYKPE-- 286
                |....:..:.|.|.|         ...||..   |..|   ...|..||...| ||..|  
Human   975 ----PFRISMTFKNNSPSG---------GETKCVF---WNFR---LANNTGGWDSSG-CYVEEGD 1019

  Fly   287 ------------IIRLMQQMGSKDFDAYIDIARRTRTLEI---VGLCLSLFALIVSLLI-FCTFR 335
                        ...::....|.|..:.:.|     .|:|   ||:..|:.:|...|:: ...::
Human  1020 GDNVTCICDHLTSFSILMSPDSPDPSSLLGI-----LLDIISYVGVGFSILSLAACLVVEAVVWK 1079

  Fly   336 SLRNNRTK-IHKNLFVAMVLQVIIRLTLYLDQFRRGNKEAATNTSLSVIENTPYL-----CEASY 394
            |:..|||. :.....|.:...:::..|.::              .::.|::..|:     |.|:.
Human  1080 SVTKNRTSYMRHTCIVNIAASLLVANTWFI--------------VVAAIQDNRYILCKTACVAAT 1130

  Fly   395 VLLEYARTAMFMWMFIEGLYL-HNMVTVAVFQGSFPLKFFSR---------LGWCVPILMTTVWA 449
            ..:.:...::|.||...||.| :.:|        |.|...||         ||:..|:.::.:..
Human  1131 FFIHFFYLSVFFWMLTLGLMLFYRLV--------FILHETSRSTQKAIAFCLGYGCPLAISVITL 1187

  Fly   450 RCT---VMYMDTSLGECLWNYNLTPYYWILEGPRLAVILLNFCFLVNIIRVLVM-----KLRQSQ 506
            ..|   .:|  |....|..|:..|........|.|.::::|....:.:|..::.     |..:.:
Human  1188 GATQPREVY--TRKNVCWLNWEDTKALLAFAIPALIIVVVNITITIVVITKILRPSIGDKPCKQE 1250

  Fly   507 ASDIEQTRKAVRAAIVLLPLLGITNLLHQLAPLKTATNFAVWSYG--THF-------------LT 556
            .|.:.|..|::.   ||.||||:|                 |.:|  |.|             |.
Human  1251 KSSLFQISKSIG---VLTPLLGLT-----------------WGFGLTTVFPGTNLVFHIIFAILN 1295

  Fly   557 SFQGFFIALIYCFLNGEVRAVLLKSLATQLSVRGHPEWAPKRASMYSGAYNTAPDTDAVQPAGDP 621
            .|||.||.|..|..:.:|:..||...:..       .|:.:.:...|              .|..
Human  1296 VFQGLFILLFGCLWDLKVQEALLNKFSLS-------RWSSQHSKSTS--------------LGSS 1339

  Fly   622 SATGKRISPPNKRLN 636
            :......||.::|.|
Human  1340 TPVFSMSSPISRRFN 1354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdfrNP_001245501.1 HRM 213..272 CDD:397086 10/58 (17%)
7tmB1_PDFR 306..584 CDD:320389 67/320 (21%)
TM helix 1 308..333 CDD:320389 7/28 (25%)
TM helix 2 342..364 CDD:320389 3/22 (14%)
TM helix 3 391..418 CDD:320389 7/27 (26%)
TM helix 4 430..450 CDD:320389 6/28 (21%)
TM helix 5 469..498 CDD:320389 5/28 (18%)
TM helix 6 512..539 CDD:320389 9/26 (35%)
TM helix 7 546..571 CDD:320389 12/39 (31%)
ADGRF5XP_005248949.1 SEA 179..281 CDD:470595
IG_like 285..361 CDD:214653
Ig strand B 289..293 CDD:409353
Ig strand C 301..305 CDD:409353
Ig strand E 333..337 CDD:409353
Ig strand F 347..351 CDD:409353
IG_like 517..602 CDD:214653
GPS 993..1036 CDD:460350 11/49 (22%)
7tmB2_GPR116_Ig-Hepta 1049..1323 CDD:320382 68/322 (21%)
TM helix 1 1051..1076 CDD:320382 7/24 (29%)
TM helix 2 1091..1113 CDD:320382 2/35 (6%)
TM helix 3 1127..1150 CDD:320382 5/22 (23%)
TM helix 4 1170..1186 CDD:320382 3/15 (20%)
TM helix 5 1208..1231 CDD:320382 4/22 (18%)
TM helix 6 1255..1280 CDD:320382 12/44 (27%)
TM helix 7 1285..1310 CDD:320382 8/24 (33%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.