DRSC/TRiP Functional Genomics Resources

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Protein Alignment boi and Neo1

DIOPT Version :9

Sequence 1:NP_001096868.3 Gene:boi / 31229 FlyBaseID:FBgn0040388 Length:1105 Species:Drosophila melanogaster
Sequence 2:XP_038938340.1 Gene:Neo1 / 81735 RGDID:619837 Length:1492 Species:Rattus norvegicus


Alignment Length:1478 Identity:283/1478 - (19%)
Similarity:467/1478 - (31%) Gaps:495/1478 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 SNSSVATTLGVLFERAPESAVAPKGDEVVFECELNLKPD-RLEWRFRRGDSSEPYLYLRPSAGYN 89
            :.:||.|...:.|...|...::.:|..|:..|....:|. .:||:             :.....|
  Rat    54 AGASVRTFTPLYFLVEPVDTLSVRGSSVILNCSAYSEPSPNIEWK-------------KDGTFLN 105

  Fly    90 VTSGS------DGLAWRLRIYVSAQTAGD---YQCVAWY-GPGALASTPARLALVSIALDVGQGS 144
            :.|..      ||..:...:..|.....|   |||||.. ..|.:.|..|:||:..:.....|..
  Rat   106 LVSDDRRQLLPDGSLFISNVVHSKHNKPDEGFYQCVATVDNLGTIVSRTAKLAVAGLPRFTSQPE 170

  Fly   145 MGARSSIRWSVAPKNCLLIRCGSVISNPPAI-WSFYRNG-------KKLPQSELLPGAAGALVLD 201
            ..       |:...|..::.|.......|.: |...|..       .|||        :|.||:.
  Rat   171 PS-------SIYVGNSGILNCEVNADLVPFVRWEQNRQPLLLDDRIVKLP--------SGTLVIS 220

  Fly   202 TVTAKDAGNYSCVATNSITGDELRLPQTIELRV--DYTDRTPPYFLQRPPIEYSARPGETVVLEC 264
            ..|..|.|.|.|:..   :|...:.....||:|  :..:.....||.||...... .|::.||.|
  Rat   221 NATEGDEGLYRCIVE---SGGPPKFSDEAELKVLQESEEMLDLVFLMRPSSMIKV-IGQSAVLPC 281

  Fly   265 PGVGSPRPRVIW-SSPNVVEIYNN-RSTILSYG-LQITDVKPEDQGSYICMLDNGIAPPIDHTIK 326
            ...|.|.|.:.| .:.:|::..:: |..:|:.| |:|:||..:|.|:|.|:.||| ...|:...:
  Rat   282 VASGLPAPVIRWMKNEDVLDTESSGRLALLAGGSLEISDVTEDDAGTYFCVADNG-NKTIEAQAE 345

  Fly   327 LSVLQRPTILRGPAATLTNESNPLLLDCSASGNPQPDIYWLINGEDA-TKDPEAVVDNRSLQLKR 390
            |:|...|..|:.||.....||..::.:|..:|.|.|.:.|:.||:.. ..|...:|...:||:..
  Rat   346 LTVQVPPEFLKQPANIYARESMDIVFECEVTGKPAPTVKWVKNGDVVIPSDYFKIVKEHNLQVLG 410

  Fly   391 VQKRHAGVVQCFAKNILGETSEGNILRVNPLEITGEDDEPLGEVPVWPVHESNTGMGTSSTSGGS 455
            :.|...|..||.|:|.:|....|..|      |..|.|..:..:|...:..:.|.....:|:|  
  Rat   411 LVKSDEGFYQCIAENDVGNAQAGAQL------IILEHDVAIPTLPPTSLTSATTDHLAPATTG-- 467

  Fly   456 KNKSGRRKFKASMVPPSRPNVTRLSDESVMLRWSVPQNS--GLQITFFKVQYRMLGDGKNRRKN- 517
            ...|..|...||:|          |...:.|.|..|.:.  |..:| :.|.|...|..:.|.:| 
  Rat   468 PLPSAPRDVVASLV----------STRFIKLTWRTPASDPHGDNLT-YSVFYTKEGVARERVENT 521

  Fly   518 -----WQTTSDN----------IPYGNAHGSG----------------PG--------------- 536
                 .|.|..|          :...|.||||                ||               
  Rat   522 SQPGEMQVTIQNLMPATVYIFKVMAQNKHGSGESSAPLRVETQPEVQLPGPAPNIRAYATSPTSI 586

  Fly   537 --------QGNS-------HWRARNRDREYEMGNPPKNFTSSVTGLTAGKYYRFRIVAVYSNNDN 586
                    .||.       ::..:..|:|.::.....::|  :.||.....|.||:||.     |
  Rat   587 TVTWETPLSGNGEIQNYKLYYMEKGTDKEQDVDVSSHSYT--INGLKKYTEYSFRVVAY-----N 644

  Fly   587 KEGNTSLKFFLQNGTSKSNLPVPELREV----------ETLSESAVVLHWSLVSS-TQNEDIDGY 640
            |.|         .|.|..::.|..|.:|          |..:..::|:||...|| |||..|.||
  Rat   645 KHG---------PGVSTQDVAVRTLSDVPSAAPQNLSLEVRNSKSIVIHWQPPSSATQNGQITGY 700

  Fly   641 YAYYRPADSAAEYLKATVDG--------GMSR--------------------------SFKIDL- 670
            ...||.|...::..:..|.|        |:.|                          :|:.|| 
  Rat   701 KIRYRKASRKSDVTETVVTGTQLSQLIEGLDRGTEYNFRVAALTVNGTGPATDWLSAETFESDLD 765

  Fly   671 ----------------------------------------------------------------L 671
                                                                            |
  Rat   766 ESRVPEVPSSLHVRPLVTSIVVSWTPPENQNIVVRGYAIGYGIGSPHAQTIKVDYKQRYYTIENL 830

  Fly   672 RPGTPYEFKLQSFNSDAASEFSAIRQARTRKTHEQPA-------SSSATPVP------------- 716
            .|.:.|...|::||:  ..|...:.::...:.|...:       ::..||||             
  Rat   831 DPSSHYVITLKAFNN--VGEGIPLYESAVTRPHTDTSEVDLFVINAPYTPVPDPTPMMPPVGVQA 893

  Fly   717 ------------ANKAVEQHQ------------------NSLYPLIAGAAGGGILLLIASL---- 747
                        |:.::.:||                  |:.|   ..|....:..|:..|    
  Rat   894 SILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKY---KNANATTLSYLVTGLKPNT 955

  Fly   748 ----VVCLCLKRREN----------------SQPED------ENKPQL----------------- 769
                .|.:...||.:                |.|:|      |.||:.                 
  Rat   956 LYEFSVMVTKGRRSSTWSMTAHGATFELVPTSPPKDVTVVSKEGKPRTIIVNWQPPSEANGKITG 1020

  Fly   770 ------EHIQA---DFVTSAVLGVGGHHKSGDV------------RRLNGVIPRMNITPNPLAQE 813
                  ..:.|   |:|...|:|....|:..::            |...|:.|..........:.
  Rat  1021 YIIYYSTDVNAEIHDWVIEPVVGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPKA 1085

  Fly   814 TASDKNRNVMEL--------------RFLPPLANGNG-NGN------------------------ 839
            .:|||..|...|              .:.||::..|. :|:                        
  Rat  1086 DSSDKMPNDQALGSAGKGGRLPDLGSDYKPPMSGSNSPHGSPTSPLDSNMLLVIIVSIGVITIVV 1150

  Fly   840 -------CMARDLALERSNAEEQQDEDGHEDEKGLPAVASSSCETLEACDAAIKLNLPQKHDQEQ 897
                   |..|..:.::......:..:|....||       :|:.::..|..|      .|::.:
  Rat  1151 VVIIAVFCTRRTTSHQKKKRAACKSVNGSHKYKG-------NCKDVKPPDLWI------HHERLE 1202

  Fly   898 LDA------PNAVLEAPSKPLPPLPKKPANGAGQNN---SGLHQNGLHHAQPYHPPGTPTLMHKR 953
            |..      ||.|:..     .|:|:...:....:|   |.:||....:..........||..:|
  Rat  1203 LKPIDKSPDPNPVMTD-----TPIPRNSQDITPVDNSMDSNIHQRRNSYRGHESEDSMSTLAGRR 1262

  Fly   954 -------LDYHQQPPP--VPPHSAYYQQAPTHQ-PSPMMERSVRGH------QQPGGFHME---- 998
                   :.:..|||.  :..|..:....|.|. .|..:....|.|      ..|.|..|.    
  Rat  1263 GMRPKMMMPFDSQPPQPVISAHPIHSLDNPHHHFHSSSLASPARSHLYHPSSPWPIGTSMSLSDR 1327

  Fly   999 -------EGTPTPTRIPSLRRQRRTSGNQQVHNSHSNLNIGLSHHNNNNNNLPPHHQHLHHHPGH 1056
                   ..||:...:|:...|...:.:|....:.|:..:..|...::..:||.    .|..|.|
  Rat  1328 ANSTESVRNTPSTDTMPASSSQTCCTDHQDPEGATSSSYLASSQEEDSGQSLPT----AHVRPSH 1388

  Fly  1057 PGGLVGIP-IVPGSPRVQRSPMPSRAMIKRTRLGSHTDNISSGSLNSI 1103
            |.....:| |.|..|.:....:||..::.:..|..|..::.:.|:.::
  Rat  1389 PLKSFAVPAIPPPGPPIYDPALPSTPLLSQQALNHHLHSVKTASIGTL 1436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
boiNP_001096868.3 IG_like 42..131 CDD:214653 21/99 (21%)
IG_like 154..234 CDD:214653 20/87 (23%)
Ig 172..234 CDD:299845 17/69 (25%)
IG_like 249..329 CDD:214653 25/82 (30%)
Ig 257..329 CDD:299845 25/74 (34%)
IG_like 339..418 CDD:214653 24/79 (30%)
Ig 352..408 CDD:299845 17/56 (30%)
FN3 470..592 CDD:238020 36/185 (19%)
FN3 613..700 CDD:238020 30/196 (15%)
Neo1XP_038938340.1 IgI_1_Neogenin_like 63..159 CDD:409387 23/108 (21%)
Ig strand B 81..85 CDD:409387 1/3 (33%)
Ig strand C 94..98 CDD:409387 1/3 (33%)
Ig strand E 118..122 CDD:409387 1/3 (33%)
Ig strand F 137..142 CDD:409387 3/4 (75%)
Ig strand G 152..155 CDD:409387 1/2 (50%)
Ig 163..250 CDD:416386 21/104 (20%)
Ig strand C 193..197 CDD:409353 0/3 (0%)
Ig strand E 215..219 CDD:409353 2/3 (67%)
Ig strand F 229..234 CDD:409353 2/4 (50%)
Ig strand G 243..246 CDD:409353 0/2 (0%)
Ig 263..348 CDD:416386 28/86 (33%)
Ig strand A 263..266 CDD:409353 1/2 (50%)
Ig strand A' 268..272 CDD:409353 0/3 (0%)
Ig strand B 275..284 CDD:409353 3/8 (38%)
Ig strand C 290..295 CDD:409353 1/4 (25%)
Ig strand C' 298..304 CDD:409353 1/5 (20%)
Ig strand D 307..312 CDD:409353 1/4 (25%)
Ig strand E 313..320 CDD:409353 3/6 (50%)
Ig strand F 327..335 CDD:409353 3/7 (43%)
Ig strand G 338..348 CDD:409353 2/9 (22%)
IgI_4_Neogenin_like 355..438 CDD:409388 25/88 (28%)
Ig strand B 369..373 CDD:409388 0/3 (0%)
Ig strand C 382..386 CDD:409388 0/3 (0%)
Ig strand E 404..408 CDD:409388 1/3 (33%)
Ig strand F 418..423 CDD:409388 2/4 (50%)
Ig strand G 431..434 CDD:409388 0/2 (0%)
FN3 470..563 CDD:238020 24/103 (23%)
FN3 570..659 CDD:238020 20/104 (19%)
FN3 667..759 CDD:238020 19/91 (21%)
FN3 770..849 CDD:214495 6/80 (8%)
FN3 887..980 CDD:238020 11/95 (12%)
FN3 987..1082 CDD:238020 15/94 (16%)
Neogenin_C 1189..1492 CDD:399527 50/263 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR44170
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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