DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment boi and Robo4

DIOPT Version :9

Sequence 1:NP_001096868.3 Gene:boi / 31229 FlyBaseID:FBgn0040388 Length:1105 Species:Drosophila melanogaster
Sequence 2:XP_006510707.1 Gene:Robo4 / 74144 MGIID:1921394 Length:1074 Species:Mus musculus


Alignment Length:1145 Identity:217/1145 - (18%)
Similarity:352/1145 - (30%) Gaps:384/1145 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 VGQGSMGARSSIRWSVAPKNCLLIRCGSVISNPPAIWSFYRNGKKLPQSELLPGAAGALVLDTVT 204
            :|.|..|...: .|.: |...|.|..|..:.:||.|...       ||.:||.|:..|    .:.
Mouse    11 MGSGGTGLLGT-EWPL-PLLLLFIMGGEALDSPPQILVH-------PQDQLLQGSGPA----KMR 62

  Fly   205 AKDAGNYSCVATNSITGDELRLPQTIELRVDYTDRTPPYFLQRPPIEYSARPGETVVLECPGV-G 268
            .:.:|               :.|.||...::    ..|..:..|.:.| ..|..|::|..|.| |
Mouse    63 CRSSG---------------QPPPTIRWLLN----GQPLSMATPDLHY-LLPDGTLLLHRPSVQG 107

  Fly   269 SPRPRVIWSSPNVVEIYNNRSTILSYGLQITDVKPEDQGSYICMLDNGIAPPIDHTIKLS--VLQ 331
            .|:     ...|::      |.||              |.|.|...|.:...:....:||  |||
Mouse   108 RPQ-----DDQNIL------SAIL--------------GVYTCEASNRLGTAVSRGARLSVAVLQ 147

  Fly   332 RPTILRGPAATLTNESNPLLLDCSAS-GNPQPDIYWLINGEDATKDP-EAVVDNRSLQLKRVQKR 394
            ....:: |..|:......|:|:|... |.|:|.:.|..:|:.....| ...|...||.:.|.:|.
Mouse   148 EDFQIQ-PRDTVAVVGESLVLECGPPWGYPKPSVSWWKDGKPLVLQPGRRTVSGDSLMVSRAEKN 211

  Fly   395 HAGVVQCFAKNILGETSE--------------------------GNILRVNPLEITGEDDEPLGE 433
            .:|...|.|.|..|:...                          .|:..:||..:.|....|   
Mouse   212 DSGTYMCMATNNAGQRESRAARVSIQESQDHKEHLELLAVRIQLENVTLLNPEPVKGPKPGP--- 273

  Fly   434 VPVW----------PVHESNTGM--------------------GTSSTSGGS-----------KN 457
             .||          |. ||.|.:                    |..|...|.           :.
Mouse   274 -SVWLSWKVSGPAAPA-ESYTALFRTQRSPRDQGSPWTEVLLRGLQSAKLGGLHWGQDYEFKVRP 336

  Fly   458 KSGRRKFKASMV--------PPSRP--NVT-RLSDESVMLRWSVP---QNSGLQITFFKVQYRML 508
            .|||.:...|.|        .||.|  .|| |..:.||.:.|:.|   .::|: |..::|     
Mouse   337 SSGRARGPDSNVLLLRLPEQVPSAPPQGVTLRSGNGSVFVSWAPPPAESHNGV-IRGYQV----- 395

  Fly   509 GDGKNRRKNWQTTSDNIPYGNAHGSGPGQGNSHWRARNRDREYEMGNP-PKNF---TSSVTGLTA 569
                     |...:.::|..|            |.......:.|:... |.::   .::|||..|
Mouse   396 ---------WSLGNASLPAAN------------WTVVGEQTQLEIATRLPGSYCVQVAAVTGAGA 439

  Fly   570 GKYYRFRIVAVYSNNDNKEGNTSLKFFLQNGTSKSNLPVPELREVETLSESAVVLHWSLVSSTQN 634
            |                 |.:|.:...|..|.:.|                        :|||..
Mouse   440 G-----------------ELSTPVCLLLGEGKALS------------------------ISSTPP 463

  Fly   635 EDIDGYYAYYRPADSAAEYLKATVDGGMSRSFKIDLLRPGT-PYEFKLQSFNSDAASEFSAIRQA 698
            .        .||  |.:::|.......:|     .||.|.| |....|.|             .:
Mouse   464 P--------CRP--SVSQFLSYIFSSSLS-----CLLVPLTVPLALPLSS-------------TS 500

  Fly   699 RTRKTHEQPASSSATPVPANKAVEQHQNSLY--PLIAGAAGGGILLLIASLVVCLCLKRRENS-- 759
            :|.:..||.|......||  ..:||.:.:|.  .:||.:|   :||.:..|.:.:|:.||..:  
Mouse   501 QTEQAMEQSARDPRKHVP--WTLEQLRATLRRPEVIASSA---VLLWLLLLGITVCIYRRRKAGV 560

  Fly   760 ---------QPEDE-NKPQLEHIQADFVTSAVLGVGGHHKSGDVRRLNGVIPRMNITPN------ 808
                     ..||. .|.:::|..:.::........|   |.|:...:.:..|:.:.|.      
Mouse   561 HLGPGLYRYTSEDAILKHRMDHSDSPWLADTWRSTSG---SRDLSSSSSLSSRLGLDPRDPLEGR 622

  Fly   809 -------------PLAQETASDKNRNVMELRFLPP----------------LAN-----GNGNGN 839
                         ||..:|::.....:.|....||                ||.     .:.:..
Mouse   623 RSLISWDPRSPGVPLLPDTSTFYGSLIAEQPSSPPVRPSPKTPAARRFPSKLAGTSSPWASSDSL 687

  Fly   840 CMARDLALERSNA------EEQQDEDGHEDEKGLPAVASSSCETLEACDAAIKL--NL---PQKH 893
            |..|.|...|.:.      :.::.::.|:.... |.:..|....:.|.:...:.  ||   |..:
Mouse   688 CSRRGLCSPRMSLTPTEAWKAKKKQELHQANSS-PLLRGSHPMEIWAWELGSRASKNLSQSPGPN 751

  Fly   894 DQEQLDAPNAVL--------------EAPSKPLPPLPKKPANGAGQNNSGLHQNGLHHAQPYHPP 944
            .....:||.||:              |..|:||||.|.. ..||..     |.......:....|
Mouse   752 SGSPGEAPRAVVSWRAVGPQLHRNSSELASRPLPPTPLS-LRGASS-----HDPQSQCVEKLQAP 810

  Fly   945 GTPTLMHKRLDYHQQPPPVPPHSAYYQQAPTHQPSPMMERSVRGHQQPGG-------------FH 996
            .:..|....|.......|..|.:::. ..|:...|.:...|:...::...             ..
Mouse   811 SSDPLPAAPLSVLNSSRPSSPQASFL-SCPSPSSSNLSSSSLSSLEEEEDQDSVLTPEEVALCLE 874

  Fly   997 MEEGTPTPTR----IPSLRRQRRTSGNQQVHNSHSNLNIGLSHHNNNNNNLPPHHQHLHHHPGHP 1057
            :.:|..|||.    :|.......|.|...:.......::|.:                   .|..
Mouse   875 LSDGEETPTNSVSPMPRAPSPPTTYGYISIPTCSGLADMGRA-------------------GGGV 920

  Fly  1058 GGLVGIPIVPGSPRVQRSPMPSRAMIKRTRLGSHTDNISS 1097
            |..||..:.|  ||...:|.||...:......:..||:.|
Mouse   921 GSEVGNLLYP--PRPCPTPTPSEGSLANGWGSASEDNVPS 958

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
boiNP_001096868.3 IG_like 42..131 CDD:214653
IG_like 154..234 CDD:214653 17/79 (22%)
Ig 172..234 CDD:299845 13/61 (21%)
IG_like 249..329 CDD:214653 18/82 (22%)
Ig 257..329 CDD:299845 16/74 (22%)
IG_like 339..418 CDD:214653 22/106 (21%)
Ig 352..408 CDD:299845 17/57 (30%)
FN3 470..592 CDD:238020 25/131 (19%)
FN3 613..700 CDD:238020 15/87 (17%)
Robo4XP_006510707.1 Ig 41..144 CDD:386229 33/158 (21%)
Ig 152..236 CDD:386229 21/84 (25%)
FN3 361..446 CDD:238020 24/128 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR44170
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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