DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment boi and prtga

DIOPT Version :9

Sequence 1:NP_001096868.3 Gene:boi / 31229 FlyBaseID:FBgn0040388 Length:1105 Species:Drosophila melanogaster
Sequence 2:NP_001038495.1 Gene:prtga / 563834 ZFINID:ZDB-GENE-061204-4 Length:1149 Species:Danio rerio


Alignment Length:862 Identity:191/862 - (22%)
Similarity:318/862 - (36%) Gaps:227/862 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 SNSSVATTLGVLFERAPESAVAPKGDEVVFECELNLK-PDRLEWRFRRG---DSSEPYLYLRPSA 86
            |.|.|.:...:.|.:.|....|.:.|.||.:|:.:.: |..:.| .:.|   ..||..       
Zfish    17 SISGVWSFSELFFIKEPHDVTAMRRDAVVLDCQAHGEAPIGIRW-LKNGVTITESERV------- 73

  Fly    87 GYNVTSGSDGLAWRLRIYVS-------AQTAGDYQCVAWYGPGALASTPARLALVSI-------- 136
             |::::||        :.:|       ....|.|||:|....|::.|..|||.:.|:        
Zfish    74 -YSLSNGS--------LLISEVESRKDKSDEGFYQCLAQNKYGSILSQRARLTIASLSTFTQQPA 129

  Fly   137 ALDVGQGSMGARSSIRWSVAPKNCLLIRCGSVISNPPAI-WSFYRNGKKLPQSELLPGAAGALVL 200
            ::.|.:||: ||.:.:.:..|              ||.| |.|.|....|....:....:|.|.:
Zfish   130 SIIVMEGSV-ARFTCKITATP--------------PPIITWEFNRVTLPLATERITVLPSGVLQI 179

  Fly   201 DTVTAKDAGNYSCVATNSITGDELRLPQTIELRVDYTDRTPPYFLQRP-----PIEYSARPGETV 260
            ..|..:|||:|.|||.|.::     ..::.|..:..|....|...|||     |...:.....|.
Zfish   180 QGVEQRDAGSYRCVAANIVS-----RRRSTEATLTVTPAMSPRAPQRPRIIAGPQNLTVPAHSTA 239

  Fly   261 VLECPGVGSPRPRVIWSSPNVVEIYNNRSTILSYG-LQITDVKPEDQGSYICMLDNGIAPPI-DH 323
            :|||...|:|||.:.||..:...|..:::.:|..| |.|:||.|:..|.|.|   ....|.. ::
Zfish   240 LLECMASGNPRPLISWSRADHKSIDVHKTKVLGNGNLIISDVNPQHAGIYFC---RATTPGTRNY 301

  Fly   324 TI---KLSVLQRPTILRGPAATLTNESNPLLLDCSASGNPQPDIYWLINGEDATKDPEAVVDNRS 385
            ||   .::||..|:::..|.:.....:......|:|.|.|.|.|.||.|||....:....:.|..
Zfish   302 TIAAANITVLAPPSLVEWPESVTRPRAGTARFVCTAEGFPTPQITWLKNGEPVRSNGRIKMYNSK 366

  Fly   386 LQLKRVQKRHAGVVQCFAKNILGETSEGNILRVNPLEITGEDDEPLGEVPVWPVHESNTGMGTSS 450
            |.:.::.....|:.||.|:||     :|::|.:..|.:...|:.|                    
Zfish   367 LVINQIIPEDDGIYQCEAENI-----QGSVLAMARLIVVMSDNRP-------------------- 406

  Fly   451 TSGGSKNKSGRRKFKASMVPPSRPNVTRLSDESVMLRWSVPQNSGLQITFFKVQYRMLGDGKNRR 515
                    |..|..:|..|          |..:::|.|..|..:..::..:.|.| |..:|.|  
Zfish   407 --------SAPRNIRADTV----------SSSAIVLAWDRPAYNSEKVIAYSVHY-MKAEGLN-- 450

  Fly   516 KNWQTTSDNIPYGNAHGSGPGQGNSHWRARNRDREYEMGNPPKNFTSSVTGLTAGKYYRFRIVAV 580
                                          |.:.:..:||....:.  :..|.||:.|.|.|||.
Zfish   451 ------------------------------NEEYQIVIGNDTTRYI--IDDLEAGRNYTFYIVAY 483

  Fly   581 YSNNDNKEGNTSLKFFLQNGTSKSNLPVPELREVETLSESAVVLHWSLVSSTQNED-IDGYYAYY 644
            .....::..:..::..|::    ..|..||| .:.:.|.|.:.:.|..:|...:.. :..|...|
Zfish   484 MPMGASRMSDHVIQHTLED----VPLRAPEL-SLTSRSPSDIQVSWQPLSHKLSRGRVSAYRLSY 543

  Fly   645 RPADSAAEYLKATVDGGMSR----SFK----IDLLRPGTPYEFKLQSFNSDAASEFSAIRQARTR 701
            |.:.          ||.:::    :.|    ::.|:|.|.|..::.:..:....|.||....||.
Zfish   544 RTSS----------DGTLTQLELSAHKTHQLLEGLQPDTTYLLRIAAATAVGWGEPSAWSSHRTP 598

  Fly   702 KTHEQPASSSATPVPANKAVEQHQNSL--------YPLIAGAAGGGILLLIASLVVCLCLKRREN 758
            |       :|:|.||.  |.|....||        :.|.||::.|         :....|...|.
Zfish   599 K-------ASSTKVPL--APELQLESLNCTTVTLRWHLPAGSSSG---------LQGFKLSYHEE 645

  Fly   759 SQPEDENKPQLEHIQADFVTSAVLGVGGHHKSGDVRRLNGVIPRMNITPNPL----------AQE 813
            .|.|                :|...:..||:.   ..:.|:.||.......|          |.:
Zfish   646 GQSE----------------AAQAQIPPHHRQ---HTIGGLDPRKKYHIKLLAFSFMGDGYQADQ 691

  Fly   814 TASDKNRNVMELRFLPP 830
            |.|......:..|.:||
Zfish   692 TISTPGCVSVRDRLVPP 708

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
boiNP_001096868.3 IG_like 42..131 CDD:214653 23/99 (23%)
IG_like 154..234 CDD:214653 20/80 (25%)
Ig 172..234 CDD:299845 19/62 (31%)
IG_like 249..329 CDD:214653 25/84 (30%)
Ig 257..329 CDD:299845 24/76 (32%)
IG_like 339..418 CDD:214653 22/78 (28%)
Ig 352..408 CDD:299845 19/55 (35%)
FN3 470..592 CDD:238020 20/121 (17%)
FN3 613..700 CDD:238020 17/95 (18%)
prtgaNP_001038495.1 immunoglobulin domain 28..118 26/106 (25%)
Ig1_Neogenin 28..118 CDD:143199 26/106 (25%)
I-set 29..118 CDD:254352 26/105 (25%)
immunoglobulin domain 122..211 25/108 (23%)
I-set 124..210 CDD:254352 25/105 (24%)
Ig 126..210 CDD:299845 25/103 (24%)
immunoglobulin domain 222..309 26/89 (29%)
IG_like 228..310 CDD:214653 25/84 (30%)
IGc2 237..296 CDD:197706 21/61 (34%)
immunoglobulin domain 314..384 18/69 (26%)
IG_like 320..399 CDD:214653 23/83 (28%)
Ig 332..399 CDD:299845 22/71 (31%)
FN3 406..499 CDD:238020 25/165 (15%)
fibronectin type III domain 406..491 25/157 (16%)
fibronectin type III domain 504..590 19/96 (20%)
FN3 507..597 CDD:238020 20/100 (20%)
fibronectin type III domain 606..690 20/113 (18%)
FN3 606..686 CDD:238020 20/109 (18%)
fibronectin type III domain 710..794
FN3 713..801 CDD:238020
fibronectin type III domain 806..895
FN3 809..901 CDD:238020
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1060..1149
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR44170
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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