DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment boi and robo3

DIOPT Version :9

Sequence 1:NP_001096868.3 Gene:boi / 31229 FlyBaseID:FBgn0040388 Length:1105 Species:Drosophila melanogaster
Sequence 2:NP_608592.2 Gene:robo3 / 33314 FlyBaseID:FBgn0041097 Length:1342 Species:Drosophila melanogaster


Alignment Length:1333 Identity:269/1333 - (20%)
Similarity:423/1333 - (31%) Gaps:458/1333 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 IYTLQASD----SNSSVAT-TLGVL---FERAPESAVAPKGDEVVFECEL--NLKPDRLEWRFRR 72
            ||..:|.:    :.|..|| .:.||   |...|::....:||..:.||..  .:....:.|  ::
  Fly    95 IYWCEAKNELGVARSRNATLQVAVLRDEFRLEPQNTRIAQGDTALLECAAPRGIPEPTVTW--KK 157

  Fly    73 GDSSEPYLYLRPSAGYNVTSGSDGLAWRLRIYVSAQT-AGDYQCVAWYGPGALASTPARL----- 131
            |...   |.|..|....:..|.:     |.|..:.|| .|.|||:|....|...|:.|.|     
  Fly   158 GGQK---LDLEGSKRVRIVDGGN-----LAIQDARQTDEGQYQCIAKNPVGVRESSLATLKVHVK 214

  Fly   132 ---------------ALVSIALDVGQGSMGARSSIRWSVAPKNCLLIRCGSVISNPPAIWSFYRN 181
                           |.|:....||...|                          |..:|....:
  Fly   215 PYIIRGPHDQTVLEGASVTFPCRVGGDPM--------------------------PDVLWLRTAS 253

  Fly   182 GKKLPQSELLPGAAGALVLDTVTAKDAGNYSCVATNSITGDELRLPQTIELRVDYTDRTPPYFLQ 246
            |..:|...:......:|.|:.||..|.|.|||.|.| :.|       .|......|...||.|:|
  Fly   254 GGNMPLDRVSVLEDRSLRLERVTIADEGEYSCEADN-VVG-------AITAMGTLTVYAPPKFIQ 310

  Fly   247 RPPIEYSARPGETVVLECPGVGSPRPRVIWSSPNVVEIYNNRSTILSYG---------------- 295
            ||..: |...|.....||..:|:|:|.:.|:       ..|.||::..|                
  Fly   311 RPASK-SVELGADTSFECRAIGNPKPTIFWT-------IKNNSTLIFPGAPPLDRFHSLNTEEGH 367

  Fly   296 --LQITDVKPEDQGSYI-CMLDNGIAPPIDHTIKLSVLQR-----PTILRGPAATLTNESNPL-- 350
              |.:|..:..|:...| |...|.:| .|...::||:..:     |.|:.||    .|::.|:  
  Fly   368 SILTLTRFQRTDKDLVILCNAMNEVA-SITSRVQLSLDSQEDRPPPIIISGP----VNQTLPIKS 427

  Fly   351 --LLDCSASGNPQPDIYWLING--------EDATKDPEAVVDNRSLQLKRVQKRHAGVVQCFAKN 405
              .|.|.|.|.|.|.|.|..:|        .:.|...:.::.:    |.|.|.:  |:..|.|.:
  Fly   428 LATLQCKAIGLPSPTISWYRDGIPVQPSSKLNITTSGDLIISD----LDRQQDQ--GLYTCVASS 486

  Fly   406 ILGETSEGNILRVNPLEITGEDDEPLGEVPVWPVHESNTGMGTSSTSGGSKNKSGRRKFKASMVP 470
            ..|:::....||:              |:|..|                  |....|..:.:..|
  Fly   487 RAGKSTWSGFLRI--------------ELPTNP------------------NIKFYRAPEQTKCP 519

  Fly   471 --PSRPNVTRLSDESVMLRWSVPQNSGLQITFFKVQYRMLGDGKNRRKNWQTTSDNIPYGNAHGS 533
              |.:|.:...:..::.:.|.....:|.. :|......|.  ..|:.:.|...:..:       |
  Fly   520 SAPGQPKILNATASALTIVWPTSDKAGAS-SFLGYSVEMY--CTNQSRTWIPIASRL-------S 574

  Fly   534 GP-------GQGNSHW---RARNRDREYEMG-NPPKNFTSSVTGLTAGKYYRFRIVAVYSNNDNK 587
            .|       .||.::.   ||.|     .:| :||...:..:   ||||     :|.|      :
  Fly   575 EPIFTVESLTQGAAYMFIVRAEN-----SLGFSPPSPISEPI---TAGK-----LVGV------R 620

  Fly   588 EGNTSLKFFLQNGTSKSNL----------PVPELREVETLSESAVVLHWSLVSSTQNEDIDGYYA 642
            :|:.|      .|||:..|          .|.||.|......:...|.|.:.|   .:.|:|:|.
  Fly   621 DGSES------TGTSQLLLSDVETLLQANDVVELLEANASDSTTARLSWDIDS---GQYIEGFYL 676

  Fly   643 YYRPADSAAEYLKATV---DGGMSRSFKIDLLRPGTPYEFKLQSFNSDAASEFSAIRQART-RKT 703
            |.|...| :||...|:   ..|:| |..:..|...:.|||.|..|......:.|..|:.|| ...
  Fly   677 YARELHS-SEYKMVTLLNKGQGLS-SCTVPGLAKASTYEFFLVPFYKSIVGKPSNSRRMRTLEDV 739

  Fly   704 HEQP------------------------------------------------------------- 707
            .|.|                                                             
  Fly   740 PEAPPYGMEAIQFNRTSVFLKWLPPQPNRTRNGILTSYNVVVKGLDVHNTTRIFKNMTIDAAAPT 804

  Fly   708 --------------ASSSATPV-------PANKAVEQHQNSL------YPLIAGAAG-------- 737
                          |.::||.|       ||...::....||      ||:....|.        
  Fly   805 LLLANLTTGVTYYIAVAAATRVGVGPFSKPAVLRIDARTQSLDTGYTRYPISRDIADDFLTQTWF 869

  Fly   738 ----GGILLLIASLVVCLCLKRRENSQPEDENKPQLEHIQADFVTSAVLG-VGGHHKSGDVRR-- 795
                |.|:.:|..|:..|.|.:|                 ..|:....|| :.|:|..|.||:  
  Fly   870 IVLLGSIIAIIVFLLGALVLFKR-----------------YQFIKQTSLGSLHGNHAIGTVRKFP 917

  Fly   796 ---LN--GVIPRMNITPNPLAQETAS----DKNRNVMELRFLPPLANGNGN----GNCMARDLAL 847
               ||  |.:..........|.::..    |....|..      .|.|.||    |:|..::...
  Fly   918 TLPLNGGGAVGAGGSNSTAAAGQSGHGLWIDPTSGVWR------QAAGGGNPGGVGSCTTKEQLP 976

  Fly   848 ERSNAEEQQDEDGHEDEKGLPAVASSSCETLEACDAAIKLNLPQKHDQEQLDAPNAVLEAPSKPL 912
            ..:.|..||.:.        |.:       |...:....||:|     :..:...:..::|:...
  Fly   977 GYAQATAQQGQQ--------PTL-------LPDYERLSPLNMP-----DYAEVACSTFKSPTHGA 1021

  Fly   913 PPLPKKPANGAGQN-----------------NSGLHQNGLHHAQPYHPPGTPTLMHKRLDYHQQP 960
            ||:   ...|.||:                 |..|:|| .:..:|....|:....|:..||....
  Fly  1022 PPM---GGGGGGQSASLYDSCGAYATTNVVANVKLYQN-RYATKPNQSSGSNNNNHQGNDYQSTG 1082

  Fly   961 PPVPPHSAYY------QQAPTHQPSPMMERSVRGHQQPGGFHMEEGTPTPTRIPSLR-------- 1011
            ....|.||:|      ||....||:.|...:.         .....|.:|.::..:.        
  Fly  1083 MYSAPPSAHYGCLEPKQQQQQQQPNLMTTSTA---------STAILTNSPAKVKKINITENKMDQ 1138

  Fly  1012 ---RQRRT---SGNQQVHNSHSNLNIGLSHHNNNNNNLPPHHQHLHHHPGHPGGLVGIPIVPGSP 1070
               :..||   :..||:..:.:.|..||..:.|..         |.......||       .|:.
  Fly  1139 LEGKSERTNPFNQQQQLLLASNALKQGLGAYANTT---------LAAQMASGGG-------AGTL 1187

  Fly  1071 RVQRSP----MPSRAMIKRTRLGSHTDNISSGS 1099
            |.||.|    .....::.::.|..:|.|.|.|:
  Fly  1188 RRQRQPKTLYKSENNILGKSGLRQNTMNASVGA 1220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
boiNP_001096868.3 IG_like 42..131 CDD:214653 23/91 (25%)
IG_like 154..234 CDD:214653 17/79 (22%)
Ig 172..234 CDD:299845 17/61 (28%)
IG_like 249..329 CDD:214653 21/98 (21%)
Ig 257..329 CDD:299845 20/90 (22%)
IG_like 339..418 CDD:214653 21/90 (23%)
Ig 352..408 CDD:299845 16/63 (25%)
FN3 470..592 CDD:238020 26/134 (19%)
FN3 613..700 CDD:238020 24/89 (27%)
robo3NP_608592.2 Ig 22..117 CDD:299845 6/21 (29%)
I-set 23..116 CDD:254352 6/20 (30%)
I-set 122..211 CDD:254352 25/98 (26%)
Ig 125..211 CDD:299845 24/95 (25%)
I-set 215..302 CDD:254352 22/120 (18%)
Ig 232..302 CDD:299845 21/103 (20%)
I-set 306..401 CDD:254352 25/103 (24%)
Ig 320..411 CDD:299845 21/98 (21%)
I-set 412..492 CDD:254352 23/89 (26%)
IGc2 429..489 CDD:197706 16/65 (25%)
FN3 519..612 CDD:238020 19/110 (17%)
FN3 644..735 CDD:238020 27/95 (28%)
fn3 743..832 CDD:278470 5/88 (6%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452286
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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