DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment boi and igdcc4

DIOPT Version :9

Sequence 1:NP_001096868.3 Gene:boi / 31229 FlyBaseID:FBgn0040388 Length:1105 Species:Drosophila melanogaster
Sequence 2:XP_002662886.2 Gene:igdcc4 / 100141327 ZFINID:ZDB-GENE-080327-32 Length:1246 Species:Danio rerio


Alignment Length:1347 Identity:271/1347 - (20%)
Similarity:432/1347 - (32%) Gaps:398/1347 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 LQASDSNSSVATTLGVLFERAPESAVAPKGDEVVFECELNLKPDRLEWRFRRGDSSEPYLYLRPS 85
            |...:...||..:.|.    .|...|......::.:|.|.              :|||.|     
Zfish    19 LSVQEKPVSVELSCGA----GPVHVVLEPDQPLLLDCHLG--------------ASEPPL----- 60

  Fly    86 AGYNVTSGSDGL----AWRLR------IYVSAQTA---------GDYQCVAWYGPGALASTPARL 131
               |||...||:    :..:|      :.:||.:|         |.|:|::....|||.|....|
Zfish    61 ---NVTWLRDGVVLSESQTIRPLPNGSLLISAFSANGPAPAGVEGGYRCLSSSSAGALTSRTLSL 122

  Fly   132 ALVSIALDVGQGSMGARSSIRWSVAPKNCLLIRCGSV--------ISNPPAIWSFYRNGKKLPQS 188
            .|.|::              |:...|:..::...|:.        :..|...|...:.....|..
Zfish   123 HLASLS--------------RFLQDPEPQIVPVGGTARFECYVDGLPTPSITWEKDQAPLPAPTE 173

  Fly   189 ELLPG-----AAGALVLDTVTAKDAGNYSCVATNSITGDELRLPQTIELRVDYTDRTPPYFLQR- 247
            .|.|.     ..|.|.:..|:.:|.|.|.|||.||.   ..|..|...|.|.      |...|. 
Zfish   174 SLEPSRYISLPNGVLQILEVSKEDEGLYRCVAFNSA---RKRFSQDASLTVS------PGLSQES 229

  Fly   248 ------PPIEYSARPGETVVLECPGVGSPRPRVIWS----SPNVVEIYNNRSTILSYGLQITDVK 302
                  ||...:...|...|:||...|.|:|.|.||    .|...::     .:|:..|.|.|.:
Zfish   230 EVVIVAPPQNSTVVMGRPAVMECMAQGEPKPFVSWSRQDGKPIATDV-----VVLATNLVIPDTR 289

  Fly   303 PEDQGSYICMLD-----NGIAPPIDHTIKLSVLQRPTILRGPAATLTNESNPLLLDCSASGNPQP 362
            ....|.|:|..:     :.::.|.:    |.||..|.||:.|.|...:..|.....|::||:|.|
Zfish   290 SHHAGVYVCRANKPKTRDFVSSPAE----LRVLAPPIILQSPEAVSLSRGNTARFVCNSSGDPPP 350

  Fly   363 DIYWLINGEDATKDPEAVVDNRS-LQLKRVQKRHAGVVQCFAKNILGE----------TSEGNIL 416
            .:.||.|||....:......|.. |.:.:::...||..||.|.|.||.          ..||  |
Zfish   351 ALRWLKNGEPVQSNARVKTQNPGVLLINQLRLDDAGYYQCIAANSLGTACATAKLSVIVREG--L 413

  Fly   417 RVNPLEITGEDDEPLGEVPVW--PVHESNTGMGTS---STSGGSKNK------------------ 458
            ...|..::.........:..|  |.|.|:..:|.|   ..:.||.|.                  
Zfish   414 PSPPRHVSATPHSSTSALLTWDPPEHNSDQIIGFSVHYQRTAGSDNMEYQFAVNNDTTELHVKEL 478

  Fly   459 -----------------SGRRKFKASM-----VPPSRPNVTRLSDESVMLR--WSVPQNSGLQ-- 497
                             :.|.....::     ||.:.|.::.||.....:|  | :|.:|.|.  
Zfish   479 LPHTAYTFYVVAYSPMGASRPSLPVTVEMLEDVPSASPQLSLLSTSPTDIRVMW-LPLSSQLSRG 542

  Fly   498 -ITFFKVQYRMLGD----------GKNRRKNWQTTSDNIPYGNAHGSGPGQG---NSHW------ 542
             ||.:::.||.|..          |...:...:....|..|.....:|...|   :|.|      
Zfish   543 AITRYRIDYRALEQVDHIYSVEVGGNETQVTLRDLKPNQAYQLRISAGTRAGFSQSSEWASHHTP 607

  Fly   543 --------------RARNRDREYEMGNPPKNFTS------------------------------- 562
                          ||:.........:|| |.|.                               
Zfish   608 NLTQVLFAPTELKVRAKMHSLHVTWQSPP-NHTQITGYKLSWREADGDELTNEEKPVISERIQQI 671

  Fly   563 ---------SVTGLTAGKYYRFRIVAVYSNNDNKEGNTSL-----KFFLQNGTSKSNLPVPELR- 612
                     .||||...:.|..|   |::.|...||..::     :...:..|:.|..|:|.:. 
Zfish   672 KLRKRIKHHEVTGLAPDRLYEVR---VWAFNKQTEGYPAVWKGRTEKLTRVRTTDSLPPLPPISV 733

  Fly   613 EVETLSESAVVLHWSLVSSTQNEDIDGYYAYYRPAD----SAAEYLKATVDGGMSRSFKIDLLRP 673
            .....|.:::.|.|. .....|..|..|.....||.    |...|..::     |:...:..|:|
Zfish   734 RARANSSTSIWLRWE-KPHFSNVRIINYTIRCSPAGIRNASLVSYYTSS-----SQEILLGSLKP 792

  Fly   674 GTPYEFKLQSFNSDAASEFSA-IRQARTRKTHEQPASSSATPVPANKAVEQHQNSLYPLIAGAAG 737
            .|.||..:||..:|.:..||: :.::........|.....:.:.:...:...:..|.|       
Zfish   793 FTSYEIAVQSNGADMSGPFSSTVEESTLPDRPSSPVDMQLSALDSFSVLVSWRPPLEP------- 850

  Fly   738 GGILLLIASLVVCLCLKRRENSQPEDENKPQLEHIQADFVTSA-----VLGVGGHHKSGDVRRLN 797
            .|::|....|..       .|....|.....|.|  ..:||||     :.|...:.|.       
Zfish   851 NGVVLTYWILYT-------PNISHPDYQWTNLTH--DGYVTSAEVPGLMSGTRYYFKM------- 899

  Fly   798 GVIPRMNITPNPLAQETASDKNRNVMELRFLPPLANGNGNG-NCMARDLALERSNAEEQQDEDGH 861
            |....:.:.|....::..:...:..:::..:..:..|...| .|:...:.:...|. :.:|..|.
Zfish   900 GACTEVGVGPYSPVKDVYTPPKKYELDIHAVTGIIVGVCLGLLCILLCMCISFRNG-KTRDVTGG 963

  Fly   862 EDEKGL---------PAVASSSCETLEACDAAIKLNLPQKHDQEQLDAPNAVLEAPSKPLPPLPK 917
            .|...|         |..|:|:...:..|...        |:.|.| .|::..| ||:||.. |.
Zfish   964 LDSSSLSPQYRKGNRPVPAASAAAAVPDCSDC--------HELETL-MPSSAQE-PSRPLTE-PS 1017

  Fly   918 KPANGAGQNNSGLHQNGLHHAQP----------------YHP--------------PGTPTLMHK 952
            :..:..|  |.|...:||...:|                |..              .|.|:..:|
Zfish  1018 EEHSLMG--NVGAADDGLAEPKPAWNGSVSRNWANRITRYRDTITEDSSALINGALEGPPSENNK 1080

  Fly   953 --------RLDYHQQPPPVPPHS----AYYQQAP------------THQPSPMMERSVRGHQQPG 993
                    .|..:|....|..||    |...|.|            :.||||..:.:      |.
Zfish  1081 SGHVERLYSLSKNQVEAEVIVHSQLSNATVDQGPQSDMELCLESPSSQQPSPGEKAT------PS 1139

  Fly   994 GFHMEEG--TPTPTRIPSLRRQRRTSGNQQVHN--------SHSNLNIGLSHHNNNNNNLPPHHQ 1048
            ..|.|:.  |.:|:..||.......|.    ||        ...|..:||::..:::..|....:
Zfish  1140 SPHSEDNHETQSPSPTPSTHISEVLSN----HNGPFESGPIGAKNQGVGLTNGFHSSKPLRSKAE 1200

  Fly  1049 HLH---HHPGHPGGLVGIPIVPGSPRVQRSPMPSRAMIKRTRLGSHT 1092
            .|.   |.....|.::..|.:|.||    |...|..::..|. |:|:
Zfish  1201 TLENGAHRLCPTGKVLPSPGLPASP----SSFTSSGLVHSTS-GAHS 1242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
boiNP_001096868.3 IG_like 42..131 CDD:214653 24/107 (22%)
IG_like 154..234 CDD:214653 21/92 (23%)
Ig 172..234 CDD:299845 19/66 (29%)
IG_like 249..329 CDD:214653 21/88 (24%)
Ig 257..329 CDD:299845 20/80 (25%)
IG_like 339..418 CDD:214653 26/89 (29%)
Ig 352..408 CDD:299845 18/56 (32%)
FN3 470..592 CDD:238020 37/199 (19%)
FN3 613..700 CDD:238020 21/91 (23%)
igdcc4XP_002662886.2 Ig 36..119 CDD:299845 24/104 (23%)
I-set 129..221 CDD:254352 22/94 (23%)
IGc2 142..209 CDD:197706 16/66 (24%)
Ig 237..317 CDD:299845 21/88 (24%)
IG_like 237..317 CDD:214653 21/88 (24%)
I-set 321..407 CDD:254352 26/85 (31%)
Ig 324..407 CDD:299845 24/82 (29%)
FN3 414..505 CDD:238020 11/90 (12%)
FN3 512..606 CDD:238020 21/94 (22%)
FN3 615..709 CDD:238020 16/97 (16%)
FN3 727..819 CDD:238020 23/97 (24%)
FN3 824..918 CDD:238020 18/116 (16%)
SH3-WW_linker 1100..>1205 CDD:293224 24/114 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR44170
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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