DRSC/TRiP Functional Genomics Resources

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Protein Alignment tko and Rps23l1

DIOPT Version :10

Sequence 1:NP_001245490.1 Gene:tko / 31228 FlyBaseID:FBgn0003714 Length:154 Species:Drosophila melanogaster
Sequence 2:XP_038948515.1 Gene:Rps23l1 / 498360 RGDID:1563570 Length:143 Species:Rattus norvegicus


Alignment Length:94 Identity:36/94 - (38%)
Similarity:53/94 - (56%) Gaps:8/94 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIPGIG-HNLQE 118
            |:.|.....|..|...|||:||:.:..:.|:||||.||||.|.| ..||::.|::|..| .|..|
  Rat    31 HLGTALKANPFGGAFHAKGIVLEKVGVEAKQPNSAIRKCVRVHLIKNGKKITAFVPNDGCLNFIE 95

  Fly   119 HN--IVLCRVGR----LQDVPGVKLKAVR 141
            .|  :::...||    :.|:|||:.|.|:
  Rat    96 ENDEVLVAGFGRKGHAVGDIPGVRFKVVK 124

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tkoNP_001245490.1 Ribosomal_S12 46..152 CDD:239466 36/94 (38%)
Rps23l1XP_038948515.1 PTZ00067 1..143 CDD:185422 36/94 (38%)

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