DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gt and dbpb

DIOPT Version :10

Sequence 1:NP_525049.1 Gene:gt / 31227 FlyBaseID:FBgn0001150 Length:448 Species:Drosophila melanogaster
Sequence 2:XP_005157954.2 Gene:dbpb / 569109 ZFINID:ZDB-GENE-100922-6 Length:374 Species:Danio rerio


Alignment Length:226 Identity:54/226 - (23%)
Similarity:96/226 - (42%) Gaps:74/226 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   286 RYTEYRKRVLEQIRSSNGGSRTVTNPKMRRTNSRSGSVNEGSS---------SNNNSESEDRAAA 341
            :|.:..:.:.|...||...:...|:.::...:|:|...|:||.         |:::|.:...|::
Zfish   132 QYMDLEEFLTENGMSSMHNTSNSTSAQIPSQSSQSAVPNQGSQCLPTSPPHCSSSSSPTSATASS 196

  Fly   342 EE--------------SSDC--DSQAGNFE--------------SKSATSSSSNLA--NATAANS 374
            ..              |:||  .:..|:.|              :..||:.:..||  :...|:.
Zfish   197 PSLLGLDMHTPQSMMGSTDCLHGTPPGSLEPTPSPSSTTCPPLPTPPATNCNELLAPFDPDPADV 261

  Fly   375 GISS--GSQ-------------------------------VKDAAYYERRRKNNAAAKKSRDRRR 406
            .:||  |.:                               :||..|:.||.|||.|||:|||.||
Zfish   262 ALSSVPGQEAFDPRRHHFSDEDLKPQPMIKKARKMLVPEDLKDEKYWSRRCKNNEAAKRSRDARR 326

  Fly   407 IKEDEIAIRAAYLERQNIELLCQIDALKVQL 437
            :||::|::|||:|||:|..|..::..::.:|
Zfish   327 LKENQISVRAAFLERENAALRQEVADMRKEL 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gtNP_525049.1 bZIP_HLF 383..440 CDD:269843 28/55 (51%)
coiled coil 384..440 CDD:269843 27/54 (50%)
dbpbXP_005157954.2 None

Return to query results.
Submit another query.