DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gt and dbpa

DIOPT Version :10

Sequence 1:NP_525049.1 Gene:gt / 31227 FlyBaseID:FBgn0001150 Length:448 Species:Drosophila melanogaster
Sequence 2:NP_001183989.1 Gene:dbpa / 565056 ZFINID:ZDB-GENE-060503-802 Length:366 Species:Danio rerio


Alignment Length:325 Identity:68/325 - (20%)
Similarity:113/325 - (34%) Gaps:131/325 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 PSASPTSNLLYAAQMQQQQHQQQQQQQQQQQQLASLYPAFYYSNIKQEQATPTAAPPKVTPTANL 193
            ||.:..|.   |||:..|..|             |..|:      :..|..|:::||        
Zfish   140 PSGNTCST---AAQVPSQSTQ-------------SAVPS------QSSQCPPSSSPP-------- 174

  Fly   194 LQTFAAASAAAAAAAAASSTNS----------------PRPASNASTMQIDVLENPLSPAVEATT 242
                .::||::.::.::||::|                |.....|.|:..|..::|..|......
Zfish   175 ----CSSSASSISSLSSSSSSSSLLGLDVPQGPGLLGGPECLHGAQTVPPDPSQSPSCPPPPVVP 235

  Fly   243 PTTSSSGEAGKNTRPFKAFPRDPLVIAANFAATDVLLDNPRVERYTEYRKRVLEQIRSSNGGSRT 307
            ||.::.....        |..||..:|.:........| ||..|::|...:....|:.    :|.
Zfish   236 PTNAADVMVN--------FDPDPADLALSSVPGQEAFD-PRRHRFSEEELKPQPMIKK----ARK 287

  Fly   308 VTNPKMRRTNSRSGSVNEGSSSNNNSESEDRAAAEESSDCDSQAGNFESKSATSSSSNLANATAA 372
            :..|                                    |.|                      
Zfish   288 MLVP------------------------------------DEQ---------------------- 294

  Fly   373 NSGISSGSQVKDAAYYERRRKNNAAAKKSRDRRRIKEDEIAIRAAYLERQNIELLCQIDALKVQL 437
                      ||..|:.||.||:.|||:|||.||:||::|::|||:|||:|..|..::..::.:|
Zfish   295 ----------KDDKYWCRRLKNDEAAKRSRDARRLKENQISVRAAFLERENAALRQEVADMRKEL 349

  Fly   438  437
            Zfish   350  349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gtNP_525049.1 bZIP_HLF 383..440 CDD:269843 27/55 (49%)
coiled coil 384..440 CDD:269843 26/54 (48%)
dbpaNP_001183989.1 bZIP_HLF 295..354 CDD:269843 27/55 (49%)
coiled coil 296..354 CDD:269843 26/54 (48%)

Return to query results.
Submit another query.