DRSC/TRiP Functional Genomics Resources

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Protein Alignment gt and hlfb

DIOPT Version :10

Sequence 1:NP_525049.1 Gene:gt / 31227 FlyBaseID:FBgn0001150 Length:448 Species:Drosophila melanogaster
Sequence 2:XP_005156391.1 Gene:hlfb / 557886 ZFINID:ZDB-GENE-110420-3 Length:300 Species:Danio rerio


Alignment Length:356 Identity:75/356 - (21%)
Similarity:122/356 - (34%) Gaps:133/356 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 DLSRRCDSVETPRKT----PSPYQTSYSYGSG-------------SPSASPTSNLLYAAQMQQQQ 147
            |..::.|....|.::    |:.:..:.||...             |.:..|:|...:...:.|..
Zfish    43 DKVKKLDEEGNPPQSAFLGPTLWDKTLSYDGDSFQLEYMDLEEFLSENGIPSSPAQHDQNLHQHH 107

  Fly   148 HQQQQQQQQQQQQLASLYPAFYYSNIK-QEQATPTAAPPKVTPTANLLQTFAAASAAAAAAAAAS 211
            ||||||||.||||.....|....|.:. ..::..||..|:     |.|.       :...:....
Zfish   108 HQQQQQQQHQQQQQQVSMPQGPISVMDLSSRSIHTAISPQ-----NCLH-------SPGRSVLPP 160

  Fly   212 STNSPRPASNASTMQIDVLENPLSPAVEATTPTTSSSGEAGKNTRPFKAFPRDPLVIAANFAATD 276
            |.|:|.|      :..:.|..|:|                         :..||..:|.:.....
Zfish   161 SRNTPSP------VDPEALHIPVS-------------------------YEPDPADLALSSVPGQ 194

  Fly   277 VLLDNPRVERYTEYRKRVLEQIRSSNGGSRTVTNPKMRRTNSRSGSVNEGSSSNNNSESEDRAAA 341
            .:.| ||..:::|...:....|:.    :|.:..|...:                          
Zfish   195 EVFD-PRKRKFSEEELKPQPMIKK----ARKIFIPDDLK-------------------------- 228

  Fly   342 EESSDCDSQAGNFESKSATSSSSNLANATAANSGISSGSQVKDAAYYERRRKNNAAAKKSRDRRR 406
                                                     :|..|:.||||||.|||:|||.||
Zfish   229 -----------------------------------------QDEKYWARRRKNNVAAKRSRDARR 252

  Fly   407 IKEDEIAIRAAYLERQNIELLCQIDALKVQL 437
            :||::|||||.:||::|:.|..::..|:.:|
Zfish   253 LKENQIAIRAGFLEKENMALRQEVADLRKEL 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gtNP_525049.1 bZIP_HLF 383..440 CDD:269843 29/55 (53%)
coiled coil 384..440 CDD:269843 29/54 (54%)
hlfbXP_005156391.1 bZIP_HLF 230..288 CDD:269843 29/54 (54%)
coiled coil 230..288 CDD:269843 29/54 (54%)

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