DRSC/TRiP Functional Genomics Resources

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Protein Alignment gt and Pdp1

DIOPT Version :10

Sequence 1:NP_525049.1 Gene:gt / 31227 FlyBaseID:FBgn0001150 Length:448 Species:Drosophila melanogaster
Sequence 2:NP_729301.1 Gene:Pdp1 / 45588 FlyBaseID:FBgn0016694 Length:647 Species:Drosophila melanogaster


Alignment Length:562 Identity:132/562 - (23%)
Similarity:178/562 - (31%) Gaps:202/562 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 MHHHQYQHHQQQPLH--HL-PHSQLPVQGSLGLPKMDLYTAYAYQQQLLGAALSQQQQQQQQQQQ 84
            :||.|.|.||||..|  || .|.|                  |:.|.:    |.||||||||..|
  Fly   122 LHHQQQQQHQQQQQHQQHLQQHHQ------------------AHHQHV----LQQQQQQQQQHSQ 164

  Fly    85 HQQLQQQHTSSAEVLDLSRRCDSVETPRKTPSPYQTSYSYGSGSPSASPTSNLLYAAQMQQQQHQ 149
            ||..||.|.....             |..|....|.........|...         |.|||||.
  Fly   165 HQHQQQHHGHPLH-------------PHHTHQQQQQQQQQQQPPPQHH---------QQQQQQHA 207

  Fly   150 QQQQQQQQQQQLA----------------------SLY---------------PAFYYSNIKQE- 176
            ||||||....|||                      |::               |...|..|.|| 
  Fly   208 QQQQQQHHAAQLAHTLSSAAVAAAAGNTGGNTNPHSIFGTGNFHYKTNNSWTLPTLTYQRIYQEN 272

  Fly   177 -----------QATPTAAPPKVTPTANLLQTFAAASAAA--------------AAAAAASSTNSP 216
                       |:...||......:.|.....|||:.|:              |..||..:.|..
  Fly   273 PHYQRNSFMDPQSNAAAAAAAAAASCNAAAVAAAAAVASGNQGSNGNASGNGNAVVAATGNGNGG 337

  Fly   217 RPA-----------------SNASTMQIDVLENPLSPAVEAT-------------TPTTS----- 246
            .|.                 ||.:...:..:.|.::.||.|.             .|.:|     
  Fly   338 NPGQNNNNNNGNNSGNSNNNSNNNVSSVQHVANAVAAAVIANEHHNHLNSLKARFQPASSGRKSP 402

  Fly   247 -------SSGEAGKNTRPF-----------------------------KAFPRDPLVIAANFAAT 275
                   |:|::..|::..                             |..|.|..:....:|..
  Fly   403 FLGFICKSNGKSTSNSKEIICPDDKYKEEGDIWNVEAQTAFLGPNLWDKTLPYDADLKVTQYADL 467

  Fly   276 DVLLDNPRV-----------ERYTEYRKRVLEQIRSSNGGSRTVTNPKMRRTNSRSGSVNEGSSS 329
            |..|....:           .....:|...|......:.|...:|. |..|:.|.|..:   |..
  Fly   468 DEFLSENNIPDGLPGTHLGHSSGLGHRSDSLGHAAGLSLGLGHITT-KRERSPSPSDCI---SPD 528

  Fly   330 NNNSESEDRAAAEESSDCDSQAGNFESKSATSSSSNLANATAANSGISS--GSQVKDAAYYERRR 392
            ..|..|    .||.:....|...:|:.::...|...|............  ..::||..|:.|||
  Fly   529 TLNPPS----PAESTFSFASSGRDFDPRTRAFSDEELKPQPMIKKSRKQFVPDELKDDKYWARRR 589

  Fly   393 KNNAAAKKSRDRRRIKEDEIAIRAAYLERQNIELLCQIDALK 434
            |||.|||:|||.||.||::||:||.|||::|..|..:::.||
  Fly   590 KNNIAAKRSRDARRQKENQIAMRARYLEKENATLHQEVEQLK 631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gtNP_525049.1 bZIP_HLF 383..440 CDD:269843 30/52 (58%)
coiled coil 384..440 CDD:269843 29/51 (57%)
Pdp1NP_729301.1 NAM-associated 514..609 CDD:464129 32/101 (32%)
bZIP_HLF 580..639 CDD:269843 30/52 (58%)
coiled coil 581..639 CDD:269843 29/51 (57%)

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