DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gt and Pdp1

DIOPT Version :9

Sequence 1:NP_525049.1 Gene:gt / 31227 FlyBaseID:FBgn0001150 Length:448 Species:Drosophila melanogaster
Sequence 2:NP_729301.1 Gene:Pdp1 / 45588 FlyBaseID:FBgn0016694 Length:647 Species:Drosophila melanogaster


Alignment Length:562 Identity:132/562 - (23%)
Similarity:178/562 - (31%) Gaps:202/562 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 MHHHQYQHHQQQPLH--HL-PHSQLPVQGSLGLPKMDLYTAYAYQQQLLGAALSQQQQQQQQQQQ 84
            :||.|.|.||||..|  || .|.|                  |:.|.:    |.||||||||..|
  Fly   122 LHHQQQQQHQQQQQHQQHLQQHHQ------------------AHHQHV----LQQQQQQQQQHSQ 164

  Fly    85 HQQLQQQHTSSAEVLDLSRRCDSVETPRKTPSPYQTSYSYGSGSPSASPTSNLLYAAQMQQQQHQ 149
            ||..||.|.....             |..|....|.........|...         |.|||||.
  Fly   165 HQHQQQHHGHPLH-------------PHHTHQQQQQQQQQQQPPPQHH---------QQQQQQHA 207

  Fly   150 QQQQQQQQQQQLA----------------------SLY---------------PAFYYSNIKQE- 176
            ||||||....|||                      |::               |...|..|.|| 
  Fly   208 QQQQQQHHAAQLAHTLSSAAVAAAAGNTGGNTNPHSIFGTGNFHYKTNNSWTLPTLTYQRIYQEN 272

  Fly   177 -----------QATPTAAPPKVTPTANLLQTFAAASAAA--------------AAAAAASSTNSP 216
                       |:...||......:.|.....|||:.|:              |..||..:.|..
  Fly   273 PHYQRNSFMDPQSNAAAAAAAAAASCNAAAVAAAAAVASGNQGSNGNASGNGNAVVAATGNGNGG 337

  Fly   217 RPA-----------------SNASTMQIDVLENPLSPAVEAT-------------TPTTS----- 246
            .|.                 ||.:...:..:.|.::.||.|.             .|.:|     
  Fly   338 NPGQNNNNNNGNNSGNSNNNSNNNVSSVQHVANAVAAAVIANEHHNHLNSLKARFQPASSGRKSP 402

  Fly   247 -------SSGEAGKNTRPF-----------------------------KAFPRDPLVIAANFAAT 275
                   |:|::..|::..                             |..|.|..:....:|..
  Fly   403 FLGFICKSNGKSTSNSKEIICPDDKYKEEGDIWNVEAQTAFLGPNLWDKTLPYDADLKVTQYADL 467

  Fly   276 DVLLDNPRV-----------ERYTEYRKRVLEQIRSSNGGSRTVTNPKMRRTNSRSGSVNEGSSS 329
            |..|....:           .....:|...|......:.|...:|. |..|:.|.|..:   |..
  Fly   468 DEFLSENNIPDGLPGTHLGHSSGLGHRSDSLGHAAGLSLGLGHITT-KRERSPSPSDCI---SPD 528

  Fly   330 NNNSESEDRAAAEESSDCDSQAGNFESKSATSSSSNLANATAANSGISS--GSQVKDAAYYERRR 392
            ..|..|    .||.:....|...:|:.::...|...|............  ..::||..|:.|||
  Fly   529 TLNPPS----PAESTFSFASSGRDFDPRTRAFSDEELKPQPMIKKSRKQFVPDELKDDKYWARRR 589

  Fly   393 KNNAAAKKSRDRRRIKEDEIAIRAAYLERQNIELLCQIDALK 434
            |||.|||:|||.||.||::||:||.|||::|..|..:::.||
  Fly   590 KNNIAAKRSRDARRQKENQIAMRARYLEKENATLHQEVEQLK 631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gtNP_525049.1 bZIP_HLF 383..440 CDD:269843 30/52 (58%)
coiled coil 384..440 CDD:269843 29/51 (57%)
Pdp1NP_729301.1 bZIP_HLF 580..639 CDD:269843 30/52 (58%)
coiled coil 581..639 CDD:269843 29/51 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3119
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11988
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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