DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gt and slbo

DIOPT Version :9

Sequence 1:NP_525049.1 Gene:gt / 31227 FlyBaseID:FBgn0001150 Length:448 Species:Drosophila melanogaster
Sequence 2:NP_001286836.1 Gene:slbo / 37889 FlyBaseID:FBgn0005638 Length:449 Species:Drosophila melanogaster


Alignment Length:502 Identity:104/502 - (20%)
Similarity:150/502 - (29%) Gaps:215/502 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 LPKMDLYTAYAYQQQLLG----AALSQQQQQQQQQQQHQQLQQQHTSSAEVLDLSRRCDSVETPR 112
            |.::||......||..:|    .|:|..|||||||||.||.|||                     
  Fly    17 LAQLDLKKEPPLQQATIGQITLTAMSTAQQQQQQQQQQQQQQQQ--------------------- 60

  Fly   113 KTPSPYQTSYSYGSGSPSASPTSNLLYAAQMQQQQHQQQQQQQ---------------------Q 156
                                           ||||.|||.|||                     .
  Fly    61 -------------------------------QQQQQQQQPQQQTTDANNNTSQDAALLVKQHAMH 94

  Fly   157 QQQQLASLYPAFYYSNIKQEQ-----ATPTAAPPKVTPTANL------------LQTFAAASAAA 204
            |.||:|:|..   .:|:.|:|     :|.|......|....|            .:|....|...
  Fly    95 QMQQVAALGS---NNNLLQKQMLQQYSTQTDLDELTTQEITLDLQHLIDDQFRDTETLGIFSDMV 156

  Fly   205 AAAAAASSTNSP--RPASNASTMQIDVLENP------------------LSPAVEATTPTTS-SS 248
            .:....|:|..|  ..::.|..:|...|.|.                  :...|.||...:| .:
  Fly   157 TSPGGLSATLPPSGMVSAAAKVLQQQTLRNQHGYGGRGGGGGAGGALAYMPQPVHATYNNSSDEN 221

  Fly   249 GEAGKNTRPFKAFPRDPLVIAANFAATDVLLDNPRVERYTEYRKRVLEQIRSS------------ 301
            ...|.::...|..|.||                       |||:.:.|.....            
  Fly   222 SSVGSDSSTIKEEPIDP-----------------------EYRRHLQEAASQQAAFMGNGAGLYN 263

  Fly   302 ----------------NGGSRTVTNPKMRRTNSRSGSVNEGSSSNNNSESEDRAAAEESSDCDSQ 350
                            |||:   |.|....:|..:||.| ||...|.:.:...|           
  Fly   264 GYGSGANGLTGGGNPLNGGN---TTPSSNGSNGSTGSSN-GSQFTNLTTANVLA----------- 313

  Fly   351 AGNFESKSATSSSSNLANATA--------------------ANSGISSGSQVKDAAYYERRRKNN 395
            ..|....:|.:.:.||....:                    :|..:..|:.    .|..||.:||
  Fly   314 HHNLPHLAAAAGAHNLLKQHSKLHAQQQHQQHQQQQQHRKHSNKHVDKGTD----EYRRRRERNN 374

  Fly   396 AAAKKSRDRRRIKEDEIAIRAAYLERQNIELLCQIDALKVQLAAFTS 442
            .|.:|||::.:::..|:       |.:...||.:.|||..||...|:
  Fly   375 IAVRKSREKAKVRSREV-------EERVKSLLKEKDALIRQLGEMTN 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gtNP_525049.1 bZIP_HLF 383..440 CDD:269843 18/56 (32%)
coiled coil 384..440 CDD:269843 18/55 (33%)
slboNP_001286836.1 bZIP_CEBP 362..420 CDD:269841 20/64 (31%)
coiled coil 363..420 CDD:269841 19/63 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3119
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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