DRSC/TRiP Functional Genomics Resources

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Protein Alignment gt and vri

DIOPT Version :10

Sequence 1:NP_525049.1 Gene:gt / 31227 FlyBaseID:FBgn0001150 Length:448 Species:Drosophila melanogaster
Sequence 2:NP_477191.1 Gene:vri / 33759 FlyBaseID:FBgn0016076 Length:729 Species:Drosophila melanogaster


Alignment Length:344 Identity:77/344 - (22%)
Similarity:126/344 - (36%) Gaps:113/344 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 TSYSYGSGSPSASPTSNLLYAAQMQQQQHQQQQQQQQQQQQLASLYPAFYYSNI----------- 173
            |..:|.:.....:|::|.....| .|..:...|.|||.||:||.|:   :||..           
  Fly    30 TDTNYINNYKQDNPSNNKFPRIQ-AQSNNSHLQHQQQLQQKLAQLH---HYSQQKLSGSDFPYGP 90

  Fly   174 ------KQEQATPTAAPPKVTPTANLLQTFAAASAAAAAAAAASSTNSPRPASNASTMQIDVLEN 232
                  |:|:....|.|.|:.|.|::                             ||...:||..
  Fly    91 RPPTGGKEEKLLLLAPPGKLYPEASV-----------------------------STAMPEVLSG 126

  Fly   233 PLSPAVEATTPTTSSSGEAGKNTRPFKAFPRDPLVIAANFAATDVLLDNPRVERYTEYRKRVLEQ 297
                     |||.|.:                    .||.|    :::|.|:..        :..
  Fly   127 ---------TPTNSHN--------------------KANIA----MMNNVRLSN--------ISP 150

  Fly   298 IRSSNGGSRTVTNPKMRRTNSRSGSVNEGSSSNNNSESEDRAAAEES------SDCDSQAGNFES 356
            ..|.||.|...:|  :...:...||::..|:.:..|:|..:......      :...||.||...
  Fly   151 TLSMNGSSNEASN--LHPLSMYGGSISPQSNDSGMSDSLGKYVPGSGYGDGMMAQSPSQGGNGPQ 213

  Fly   357 KSATSSSSNLANA------TAANSGISSGSQVKDAAYYERRRKNNAAAKKSRDRRRIKEDEIAIR 415
            .:.|::...|.:.      |..|.        ||.:|::|||:||.|||:||::||..:..:..|
  Fly   214 SALTAAQKELFSQRKQREFTPDNK--------KDESYWDRRRRNNEAAKRSREKRRYNDMVLEQR 270

  Fly   416 AAYLERQNIELLCQIDALK 434
            ...|.::|..|..|:||::
  Fly   271 VIELTKENHVLKAQLDAIR 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gtNP_525049.1 bZIP_HLF 383..440 CDD:269843 22/52 (42%)
coiled coil 384..440 CDD:269843 21/51 (41%)
vriNP_477191.1 bZIP_NFIL3 238..297 CDD:269842 22/52 (42%)
coiled coil 239..297 CDD:269842 21/51 (41%)

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