DRSC/TRiP Functional Genomics Resources

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Protein Alignment gt and cebp-1

DIOPT Version :10

Sequence 1:NP_525049.1 Gene:gt / 31227 FlyBaseID:FBgn0001150 Length:448 Species:Drosophila melanogaster
Sequence 2:NP_508276.2 Gene:cebp-1 / 180481 WormBaseID:WBGene00016997 Length:319 Species:Caenorhabditis elegans


Alignment Length:96 Identity:28/96 - (29%)
Similarity:44/96 - (45%) Gaps:16/96 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   341 AEESSDCDSQAGN-----FESKSATSSSSNLAN----ATAANSGISSGSQVKDAAYYERRRKNNA 396
            :|||||.....|:     ||.||..:.|:.|.|    ..|....:.:..:..:..|..:|.:||.
 Worm   181 SEESSDMTDNDGSVDDSYFEPKSKKTKSAGLENFKPQTRARKYKLKADEEKAEPTYKLKRARNND 245

  Fly   397 AAKKSR-------DRRRIKEDEIAIRAAYLE 420
            |.:|||       |::..:.|::..|.|.||
 Worm   246 AVRKSRKKAKELQDKKEAEHDKMKRRIAELE 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gtNP_525049.1 bZIP_HLF 383..440 CDD:269843 14/45 (31%)
coiled coil 384..440 CDD:269843 14/44 (32%)
cebp-1NP_508276.2 DUF5401 <219..319 CDD:375164 15/58 (26%)
bZIP 233..280 CDD:473870 14/44 (32%)
coiled coil 236..280 CDD:269834 14/41 (34%)

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