DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gt and Pdp1

DIOPT Version :10

Sequence 1:NP_525049.1 Gene:gt / 31227 FlyBaseID:FBgn0001150 Length:448 Species:Drosophila melanogaster
Sequence 2:XP_061503537.1 Gene:Pdp1 / 1276989 VectorBaseID:AGAMI1_009149 Length:465 Species:Anopheles gambiae


Alignment Length:481 Identity:114/481 - (23%)
Similarity:171/481 - (35%) Gaps:191/481 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 QQPLHHLPHSQLPVQGSLGLPKMDLYTAYAYQQQLLGAALSQQQQQQQQQQQHQQLQQQHTSSAE 97
            ||.:|:|.|  |...|.||                :|....|||||||||||.||          
Mosquito    81 QQVVHNLQH--LTNVGGLG----------------MGGNPQQQQQQQQQQQQQQQ---------- 117

  Fly    98 VLDLSRRCDSVETPRKTPSPYQTSYSYGSGSPSASPTSNLLYAAQMQQQQHQQQQQQQQQQQQLA 162
                                                          ||||||.||||||..|.|.
Mosquito   118 ----------------------------------------------QQQQHQHQQQQQQTHQNLL 136

  Fly   163 SLYPAFYYSNIKQEQATPTA---------APPKVTPTANLLQTFAAASAAAAAAAAASSTNSPRP 218
            :       ||      ||.|         ....:.||:.|||          |....:|.|:...
Mosquito   137 T-------SN------TPGANGLTGIHHGGTQNLPPTSQLLQ----------AIHQNTSNNNNNG 178

  Fly   219 A----SNASTMQIDVLENPLSPAVEATT----------------PTTSSSGEAGK---------- 253
            |    :|.:|:.::...|..:....:.|                .|:::....|:          
Mosquito   179 ANNNNNNNNTINLNNNSNGNNNNNNSITQYQVQQLWRHHAYLNGKTSNNKDICGEDKHKEENDPW 243

  Fly   254 NTRPFKAFPRDPLVIAANFAATDVLLDNP-RVERYTEYRKRVLEQIRSSNG----GSRTVTNPKM 313
            |.....||      :..|.....:..|:. :|.:.:||..  |::..|.||    |   :.|..:
Mosquito   244 NVETHSAF------LGPNLWDKTLPYDSDLKVHQVSEYAD--LDEFLSENGIPYDG---IPNSNL 297

  Fly   314 RRTNSRSGSVNEG-------SSSNNNSESEDRAAAEESSDCDSQAGNFESKSATSSSSNLANATA 371
            ..:.|.:|..::.       |.|.....:..|..:...|||.|.    |:.:..|.:.::.:.||
Mosquito   298 GNSTSLTGQRSDSIGHCAGLSLSGLGQVTTKRERSPSPSDCMSP----ETMNPPSPADSIFDVTA 358

  Fly   372 ANSGISSG----------------------------SQVKDAAYYERRRKNNAAAKKSRDRRRIK 408
            .:...:..                            .::||..|:.||||||.|||:|||.||:|
Mosquito   359 FSMSSTRDFDPRTRAFSDEELKPQPMIKKSRKQFVPDEMKDDKYWARRRKNNMAAKRSRDARRMK 423

  Fly   409 EDEIAIRAAYLERQNIELLCQIDALK 434
            |::||:||.|||::|:.|..:::.||
Mosquito   424 ENQIALRAGYLEKENMNLHREVEQLK 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gtNP_525049.1 bZIP_HLF 383..440 CDD:269843 30/52 (58%)
coiled coil 384..440 CDD:269843 29/51 (57%)
Pdp1XP_061503537.1 None

Return to query results.
Submit another query.