DRSC/TRiP Functional Genomics Resources

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Protein Alignment gt and CEBPA

DIOPT Version :10

Sequence 1:NP_525049.1 Gene:gt / 31227 FlyBaseID:FBgn0001150 Length:448 Species:Drosophila melanogaster
Sequence 2:NP_001274353.1 Gene:CEBPA / 1050 HGNCID:1833 Length:393 Species:Homo sapiens


Alignment Length:71 Identity:20/71 - (28%)
Similarity:32/71 - (45%) Gaps:5/71 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   372 ANSGISSGSQVKDA-----AYYERRRKNNAAAKKSRDRRRIKEDEIAIRAAYLERQNIELLCQID 431
            |:.|..:|...|..     .|..||.:||.|.:||||:.:.:..|...:...|...|..|..:::
Human   300 ASGGSGAGKAKKSVDKNSNEYRVRRERNNIAVRKSRDKAKQRNVETQQKVLELTSDNDRLRKRVE 364

  Fly   432 ALKVQL 437
            .|..:|
Human   365 QLSREL 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gtNP_525049.1 bZIP_HLF 383..440 CDD:269843 17/60 (28%)
coiled coil 384..440 CDD:269843 16/59 (27%)
CEBPANP_001274353.1 bZIP_CEBPA 315..375 CDD:269859 16/56 (29%)
coiled coil 317..375 CDD:269859 16/54 (30%)

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