DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gt and hlf

DIOPT Version :10

Sequence 1:NP_525049.1 Gene:gt / 31227 FlyBaseID:FBgn0001150 Length:448 Species:Drosophila melanogaster
Sequence 2:XP_004918616.1 Gene:hlf / 100489797 XenbaseID:XB-GENE-955698 Length:296 Species:Xenopus tropicalis


Alignment Length:243 Identity:65/243 - (26%)
Similarity:97/243 - (39%) Gaps:66/243 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   221 NASTMQIDV--LENPLSPAVEATTPTTSSSGEAGKN--TRPFKAFPRDPLVI-AANFAATDVLLD 280
            :..|.|::.  ||..||   |...|.:.||.|...:  :.| :|....|.|| .:|.|:|.||  
 Frog    77 DGDTFQLEYMDLEEFLS---ENGIPPSQSSHELSHHQPSHP-QASATSPSVIDLSNRASTSVL-- 135

  Fly   281 NPRVERYTEYRKRVLEQIRSSNGGSRTVTNPKMRRTNSRSGSVNEGS--SSNNNS------ESED 337
                                          |.:...|.....|..|.  ::|.|:      ||..
 Frog   136 ------------------------------PGLVPHNCMHSPVRPGQILTANRNTPSPIDPESIQ 170

  Fly   338 RAAAEESSDCDSQAGN------FESKSATSSSSNLANATAANSGISSGSQV-------KDAAYYE 389
            .|...|....|....:      |:.:....|...|    .....|....:|       :|..|:.
 Frog   171 VAVGYEPDPADLALSSIPGQEMFDPRKRKFSEEEL----KPQPMIKKARKVFIPDDLKQDEKYWA 231

  Fly   390 RRRKNNAAAKKSRDRRRIKEDEIAIRAAYLERQNIELLCQIDALKVQL 437
            ||:|||.|||:|||.||:||::|||||::||::|..|..::..|:.:|
 Frog   232 RRKKNNLAAKRSRDARRLKENQIAIRASFLEKENSALRMEVADLRKEL 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gtNP_525049.1 bZIP_HLF 383..440 CDD:269843 28/55 (51%)
coiled coil 384..440 CDD:269843 28/54 (52%)
hlfXP_004918616.1 bZIP_HLF 226..284 CDD:269843 28/54 (52%)
coiled coil 226..284 CDD:269843 28/54 (52%)

Return to query results.
Submit another query.