DRSC/TRiP Functional Genomics Resources

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Protein Alignment gt and hlf

DIOPT Version :9

Sequence 1:NP_525049.1 Gene:gt / 31227 FlyBaseID:FBgn0001150 Length:448 Species:Drosophila melanogaster
Sequence 2:XP_004918616.1 Gene:hlf / 100489797 XenbaseID:XB-GENE-955698 Length:296 Species:Xenopus tropicalis


Alignment Length:243 Identity:65/243 - (26%)
Similarity:97/243 - (39%) Gaps:66/243 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   221 NASTMQIDV--LENPLSPAVEATTPTTSSSGEAGKN--TRPFKAFPRDPLVI-AANFAATDVLLD 280
            :..|.|::.  ||..||   |...|.:.||.|...:  :.| :|....|.|| .:|.|:|.||  
 Frog    77 DGDTFQLEYMDLEEFLS---ENGIPPSQSSHELSHHQPSHP-QASATSPSVIDLSNRASTSVL-- 135

  Fly   281 NPRVERYTEYRKRVLEQIRSSNGGSRTVTNPKMRRTNSRSGSVNEGS--SSNNNS------ESED 337
                                          |.:...|.....|..|.  ::|.|:      ||..
 Frog   136 ------------------------------PGLVPHNCMHSPVRPGQILTANRNTPSPIDPESIQ 170

  Fly   338 RAAAEESSDCDSQAGN------FESKSATSSSSNLANATAANSGISSGSQV-------KDAAYYE 389
            .|...|....|....:      |:.:....|...|    .....|....:|       :|..|:.
 Frog   171 VAVGYEPDPADLALSSIPGQEMFDPRKRKFSEEEL----KPQPMIKKARKVFIPDDLKQDEKYWA 231

  Fly   390 RRRKNNAAAKKSRDRRRIKEDEIAIRAAYLERQNIELLCQIDALKVQL 437
            ||:|||.|||:|||.||:||::|||||::||::|..|..::..|:.:|
 Frog   232 RRKKNNLAAKRSRDARRLKENQIAIRASFLEKENSALRMEVADLRKEL 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gtNP_525049.1 bZIP_HLF 383..440 CDD:269843 28/55 (51%)
coiled coil 384..440 CDD:269843 28/54 (52%)
hlfXP_004918616.1 bZIP_HLF 226..284 CDD:269843 28/54 (52%)
coiled coil 226..284 CDD:269843 28/54 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11988
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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