DRSC/TRiP Functional Genomics Resources

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Protein Alignment PsGEF and arhgef10la

DIOPT Version :10

Sequence 1:NP_996333.4 Gene:PsGEF / 31224 FlyBaseID:FBgn0264598 Length:2777 Species:Drosophila melanogaster
Sequence 2:XP_009304376.2 Gene:arhgef10la / 799435 ZFINID:ZDB-GENE-120814-1 Length:1342 Species:Danio rerio


Alignment Length:1710 Identity:317/1710 - (18%)
Similarity:512/1710 - (29%) Gaps:605/1710 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   391 SEWQARVKSGTERRTAERLAKLENA--GNEAKRSE-FLGCSTFPLNELVHPDSGVSAGSYKLHAQ 452
            |:.::|..||........|..|.:|  ..:.|:|: |...||           ...||....|::
Zfish    29 SKEESRTPSGDNTSKYSELQILSSALEATQKKQSDLFQDAST-----------SSPAGCTNTHSE 82

  Fly   453 ACPPPTSRHSQPKANAGQDQKQETEAAKDQDKQQD---------------------DSPAEMAAA 496
            ......|.|.|........:::|....||:..:.|                     |..|:.::.
Zfish    83 KPMSTASSHQQLGEKVEDKEQREKSRCKDEISKTDAGDETSTCTVWTCSSDLESTPDKQADYSSQ 147

  Fly   497 VTVTPQKPVATGSGSGSNSAAMALNDEVISISIDSMGKEDPLLPQQPQQPMKLSKKALHQRDA-- 559
            .|:| ..||..   |..|:|..:..|:.   |.||...||  |.::......:.|   .|||.  
Zfish   148 ATMT-SYPVEC---STINNATDSKRDQA---STDSTAPED--LNEEEDHTCTVVK---IQRDTCT 200

  Fly   560 -DENLFLRFLELDPP--ADGNANSTTTQAQATGSQ-------SSASKANESNANH----LNNGTS 610
             ..|.........|.  |:||. ||.::.|..|.:       |....:.|::..:    ...|..
Zfish   201 IKTNAGTEDFRHSPSQNAEGNV-STESEHQTAGPEVIYDDVPSEDLSSGEADLIYEDVQKEEGLQ 264

  Fly   611 GGRRQSTMPNSGGSS--VGGAVRQQQGRTPFTMTK----------RLTRTEERGFGFSIVWTHPP 663
            |       ||:|.||  ......|.....|.|.:|          |.|||::.            
Zfish   265 G-------PNNGWSSSEFESYDEQSDSERPPTRSKLSPDVRRLRDRYTRTKQE------------ 310

  Fly   664 RVEKIEAGLSADRCGILPGDYVIFVDKHNVVTMPEADVLNLIRSQGSSLTLEIFRRSGAGATTIT 728
                     .|.|.|          .||.|..:..|                  .|||      |
Zfish   311 ---------LAMRLG----------GKHQVHQLMRA------------------ARSG------T 332

  Fly   729 STDLGQNNVHISTRLGAAVGLGSEEHTLAT-TATGTTTVM-SLQRTTSTRIQPLANSMSRPATAC 791
            ...|.:..:.:..|:..   |..::|:..| ..||...|| |..:....::.|:.:.:       
Zfish   333 KDGLEKTKIAVMRRVSF---LHKKDHSDDTEDDTGYLDVMVSEAKHPPAQLGPMPDGL------- 387

  Fly   792 SGTTSSIEAAKRRLHLPQVTFSKESIVPVTDNRRRFLLQLISREQNFTAALHFGVDRFVQPLGER 856
                                 |.:.||     ||..|..::..|:::..:|...:..:.:||.|.
Zfish   388 ---------------------SSQQIV-----RRHILSSIVQSERSYLDSLKRILQEYQRPLMEA 426

  Fly   857 KD-LISPNDHRTLFQNIDELLRIAEDILEQLCSSDQQDQEPQMNFASRV---------------Y 905
            :. ::|....|.:|..:.|:.:         |.|     ..|:..||||               .
Zfish   427 EPRILSVRKIRPIFFRLREITQ---------CHS-----MFQIALASRVAEWDSCEKIGDLFVAS 477

  Fly   906 LSKTTAICAAYKKYCNGIKRADCVLVNKSRQTGSEFIAFITEPAVPRKRPD----LTMF--IHRP 964
            .|| :.:...|..|.|....| ..|:.|:..:...|:.|:     .||:..    :|::  :.:|
Zfish   478 FSK-SMVLDVYSDYVNNFTNA-MALIKKACLSKPAFLEFL-----KRKQASSVDRITLYGLMVKP 535

  Fly   965 LQHFREILKLMQLLAGNC---HVD-------TEEHKNFSTVINELQAAYREITVSSGLMEPLGEG 1019
            :|.|.:.:.|:|.:..|.   |||       ..|.:..:..:||.:....:||.:..|...:.:.
Zfish   536 IQRFPQFILLLQDMLKNTPTGHVDRLPLQLALTELETLAEKLNEQKRVADQITETQQLARCVSDR 600

  Fly  1020 RPLLTLQDLESRMVFTKCKPFTLAVQGRQWIFGGDLSRVEGRSVKPYWTLLFSDIIVFAKVSRDR 1084
            .....|...:|.::.  |:.....|.|.:    |.:.:.:.|.|     .||.|:::.|.::   
Zfish   601 SLSKLLNSEQSSLIL--CETLIETVYGER----GQVLKSKERKV-----FLFGDVLICANIN--- 651

  Fly  1085 VLFITEEPIPIANVVDSCFHMRKKTTEFRLTVDPNGRLAESPTGYCAPDLTRTPKRGARRKSLIL 1149
                                                  .:.|     ||::          ||:.
Zfish   652 --------------------------------------VKGP-----PDIS----------SLVP 663

  Fly  1150 RAPSLELKAVWQNLLQRQIFLVNAALGSTPLSSPLDSPDVLNTLVPLSDIGLTTASMGSMKLPSL 1214
            ..|...||  |                    |:||....|:......|....|...:||:|.|  
Zfish   664 VGPKYTLK--W--------------------SAPLQQVQVVEVGQEASQSKDTLYQLGSVKRP-- 704

  Fly  1215 DSIHLKQQQKQQRTNNSHGHVHSATGVATDRTADRSHGHNHGIHGGHVEQIELLI---------- 1269
                          .:|.|......|  ..|.........|.:  ..|||:.||:          
Zfish   705 --------------GSSFGQGSIILG--PPRLYHELQELQHDL--SVVEQVTLLVGTLQGTYQNL 751

  Fly  1270 -----DEKCRILNKTGTPKSSALHLANWMKGQLDKQQQQARLAAIARSQENVSAEDEQLIFNSDS 1329
                 .:.|..|.:....|...:..||         :.:.||....|..::.......::||:.|
Zfish   752 NTTVAQDWCLALQRLIRIKEDQIQNAN---------KCRLRLQVPGRPDKSGRPVSFTVVFNTPS 807

  Fly  1330 EQDERITYWTRQQLEK------RTKELNLAKENGGLSA----------RPNFGGKRLSGVEE--- 1375
            .. .:|::..|..|.|      .|.....|:::|...|          .|.|..|......|   
Zfish   808 PV-SKISWANRFHLAKIALRDENTPGWFFAEDDGKTKAPFWCPLLACRMPVFTSKAPEWKLEAAL 871

  Fly  1376 --------LSMSATSDIYSTSEAEGVTSVISQSHSTTSDSQITVRSSPIVLDKLAVCRHCHKNCQ 1432
                    |..||.    |||..:|...|.|.:.||.....|...:.|......::.......|.
Zfish   872 HNPVQCALLGFSAA----STSLPQGYLWVASGADSTQGQVDIFSLNRPTPRPVKSLQMGAQVRCL 932

  Fly  1433 QSGPGGARPGGGGGVNNSSSTPV--LLC-----NSLKVQHSQSSPNRCCKLSNGIAGATEMANPK 1490
            :..|..: |......:..||..|  .:|     .|:.|..|..|..:|         ...:.||:
Zfish   933 EYVPEPS-PSEDAETSLHSSAEVGNTICVGLDDGSILVYGSMDSAAQC---------LVTLHNPE 987

  Fly  1491 NSNRTGTGTGSVTSMSSSTITGELSSKVVASSSRRETGDTESDVAQLITDEISQSQSEATDDSVG 1555
                 |.....:...::....|....|::........|....|.::.:|              :|
Zfish   988 -----GCPVLCLKHCNNVLFAGLRDGKLMVYERHHRGGLWNQDTSRKVT--------------IG 1033

  Fly  1556 AMPNSSRSAGEGN---------PVITGSRLR------HLDPPVSVSSLPNGHCSAGVGGG----- 1600
            :.|..:..|.|.:         .|:.||.|.      |.||.|||:.:      ...|||     
Zfish  1034 SHPIRTLLALENSVWASCANTVTVVNGSSLSTQRFEVHQDPMVSVAHM------VRAGGGVWMAF 1092

  Fly  1601 -----------------------SPKPL--PPPRRTRVVAQM-CQEPPRPKANQQVKAIVTITET 1639
                                   :|...  |..:..||.:.: ||            .::.:...
Zfish  1093 SEGSSIRLFHTETLEHLQEINISTPSSFYNPSQKSMRVTSLLICQ------------GLLWVGTA 1145

  Fly  1640 ARIMRSSPT-KGSGSGSATGTGSVGGSPAKYAACHCRCTPEDFTHA---QLSPDKMEHQTCKLLE 1700
            ..|:.:.|. |..|....||.|.:        :.:..|.|.||..|   .||||.::.       
Zfish  1146 QGIIITLPVPKLEGIPKITGKGMM--------SFNAHCGPVDFLVALSSTLSPDLLKR------- 1195

  Fly  1701 SPKQTTTTLEQKQEDEQLSLMLIGLAQLAPAATLCGQERIPKEENSTPTIAVVPPTPDSVLTKTS 1765
                                                                     |||:   .
Zfish  1196 ---------------------------------------------------------DSVI---E 1200

  Fly  1766 THVWDNSGCSSNGGGTSTTSTATTTTKQPRQAIIENIPEDSCDESPLDEEPPYRPMSSALRRFGT 1830
            .|   :|||     |....|.:::.....:.::...:.........|.:   ||..|:       
Zfish  1201 GH---DSGC-----GVEDRSDSSSQESLQQHSVSTQVDGKGKGRGVLLQ---YRLRST------- 1247

  Fly  1831 MSSLEKLPSDDRMDEADELDDDLDSFKPNGHDGNSPQNEEDDED-----ADSERALVQNDLGASS 1890
             |.|...|...|.|||.  |..|:|.:.:..|| |.....||.|     ...||..|:.|  ..:
Zfish  1248 -SGLPGRPLTARGDEAS--DSSLESLEHSMEDG-SIYELSDDPDMWVRGRPCEREGVRRD--RVT 1306

  Fly  1891 SSGVIVNGEG---LASGAWT 1907
            |..||..|:|   |..|:.|
Zfish  1307 SVAVISGGKGFRRLREGSVT 1326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PsGEFNP_996333.4 DUF4799 <99..209 CDD:318308
C2 286..>381 CDD:425499
PDZ_canonical 645..716 CDD:483948 10/70 (14%)
RhoGEF 835..1007 CDD:470622 41/203 (20%)
PRK12323 <2304..>2415 CDD:481241
arhgef10laXP_009304376.2 None
Blue background indicates that the domain is not in the aligned region.

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