DRSC/TRiP Functional Genomics Resources

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Protein Alignment PsGEF and grid2ipb

DIOPT Version :10

Sequence 1:NP_996333.4 Gene:PsGEF / 31224 FlyBaseID:FBgn0264598 Length:2777 Species:Drosophila melanogaster
Sequence 2:XP_068080705.2 Gene:grid2ipb / 559717 ZFINID:ZDB-GENE-040724-161 Length:1414 Species:Danio rerio


Alignment Length:1227 Identity:238/1227 - (19%)
Similarity:388/1227 - (31%) Gaps:430/1227 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   653 FGFSIVWTHPPRVEKIEAGLSADRCGILPGDYVIFVDKHNVVTMPEADVLNLIRSQGS-SLTLEI 716
            |||.|....|..:..:|.|.||...|:.|||.|:.::..||.::...:|:.|.:||.: ..::.:
Zfish    43 FGFQIGGHGPSYILTVEEGSSAQLSGLQPGDQVLEIEGQNVSSLSAQEVIALAQSQRNIPPSIGV 107

  Fly   717 FRR----------SGAGATTITS------------TDLGQNNVHISTRLGAAVGLGSEEHTLATT 759
            ..|          .|....||..            :..|::.:.....:....|:..:.|.:|..
Zfish   108 VSRIQQMDITPGPDGRFGFTIVGDCPLLVEDCSPCSPAGRSGLRAGDYVMEVNGIPVKHHEMAAA 172

  Fly   760 ATGTTTVMSLQRTTSTRIQPLANSMSRPATACSGTTSSIEAAKRRLHLPQVTFSKESIVPVTDNR 824
            ....    |..||....:..:.:...|.:.:..|....|:..::......:.|::. :..:..|.
Zfish   173 LIKA----SQGRTLRLGVLCMGSRQKRSSGSLEGLQKDIDGMRQDRKHKALEFNRR-VEEILRNE 232

  Fly   825 RRFLLQLISREQNFTAALHFGVDRFVQPLG----------ERKDLIS------PNDHRTLFQNID 873
            ...      :|:.|.....|..:|.|..|.          |::.|||      |..||   |..|
Zfish   233 PEV------KEKLFAVLKQFAAERKVDWLASVLPDILTTEEQQQLISNIRIFIPKKHR---QRFD 288

  Fly   874 ELLRIAEDILEQLCSSDQQDQEPQMNFASRVYLSKTTAICAAYKKYCNGIKRADCVLVNKSRQTG 938
            |  .:::.::.::|.|.... |||    :|:..|::    ..:.:...|.|||..|    .|.||
Zfish   289 E--AVSQSLINRMCRSKSLG-EPQ----NRLRRSRS----QDHHERPQGSKRASSV----PRDTG 338

  Fly   939 SE------------------FIAFITEPAV----PRKRPDLTMFIHRP----------------L 965
            .|                  :::.:.:..:    .:|....|:..|.|                |
Zfish   339 DEAAQNDRTLRKSNTMIPTQYVSGVNQRTIRVYRGKKSFGFTLRGHAPVWIDSVMPGSPAEACGL 403

  Fly   966 QHFREILKLMQLLAGNCHVDTEEHKNFSTVINELQ--AAYREITVSSGLME-PLGEGRPLLTLQD 1027
            :....||.|..|...||     .|:.   |::.||  .|...:.|..|.:: |..:..|..|...
Zfish   404 KTGDRILFLNGLDMRNC-----SHEK---VVSMLQGSGAMPSLVVEEGPVDYPQSDSEPEETPSA 460

  Fly  1028 LESRMVFTKCKPFTLAVQGRQWIFGGDL----SRVEGRSVKPYWTLLFSDIIVFAKVSRDRVLFI 1088
            ..||         :.|:...||:  .::    .||.||:        ||..:        ..|..
Zfish   461 PRSR---------SPALSSLQWV--AEILPPSIRVHGRT--------FSQQL--------EHLLT 498

  Fly  1089 TEEPIPIANVVDSCFHMRKKTTEFRLTVD--PNGRLAESPT-----------------GYCAPDL 1134
            .:|...|...:::.|..|...|   |.||  |   :.::|.                 .:|...:
Zfish   499 LQERYTICKALETFFQHRNVDT---LIVDVFP---VLDTPAKQLIWQFIYQLLTYEEQEHCKTKI 557

  Fly  1135 TR-------TPKRGA--RRKSLILRAPSLELKAVWQNLLQRQI---FLVNAALGSTPLSSPL--- 1184
            .|       .|:.||  .|:|..:|......|    |.::.:.   .::...||....:.|:   
Zfish   558 ARFLGFKSAEPEVGAETHRRSSSMRVSGTSHK----NTVRERSSDDCIIGTHLGMGTFTDPVTPE 618

  Fly  1185 -----------DSPDVLNTLVPLSDIGLTTASMGSMKLPSLDSIHLKQQQKQQRTNNSHGHVHSA 1238
                       :|||:.:.....:::|              :...:|..|..|    ||....:|
Zfish   619 ERQCGDGTSFPESPDLSHMTGVYTELG--------------NVYPVKSSQSLQ----SHSSPRAA 665

  Fly  1239 -TGVATDRTADRSHGHNHGIHGGHVEQIELLIDEKCRILNKTGTPKSSALHLANWMKG----QLD 1298
             .|:|...|..:|..|:                        |...:.|.|.| .|...    |.:
Zfish   666 GMGLAESNTYTQSFTHS------------------------TAGNRKSGLSL-TWTDSFPGPQFE 705

  Fly  1299 KQQQQARLAAIARSQENVSAE--------DEQLIFNSDSEQDERITYWTRQQLEKRT-KELNLAK 1354
            ..||.........|...||.:        .::|   |...|..::..::|....:.| |.|:...
Zfish   706 TYQQTVASPDSVDSNPYVSLDSPPASPLPSDEL---SPLPQRRKLFTFSRPPRSRDTDKFLDALS 767

  Fly  1355 ENGGLSARPNF-----GGKRLSGVEELSM--------------SATSDIYSTSEAEGVTSVISQS 1400
            |.  |..|.|.     ||:  :..||:|.              ||:|:.:|:|:..  |||   |
Zfish   768 EQ--LGHRVNIVDDFKGGE--NDYEEMSFQDEQEVNMLPHELSSASSEDHSSSDDS--TSV---S 823

  Fly  1401 HSTTSDS---------------QITVRSSPIVLDK--------------------------LAVC 1424
            :|:.||.               |.|...||:.:..                          ||..
Zfish   824 YSSGSDHIPPPPQSPPPPPPPLQFTDSPSPLPITPEHLPQPPPAFQHHPIIAPPPPPPRPFLANR 888

  Fly  1425 RHCHK--------NCQQSGPGGARPGGGGGVNNSSSTPVLLCNSLKVQHS--QSSPNRCCKLSNG 1479
            ...||        ..|.|.|..:.|       ..||.|:|..:..|. |.  ||||:...:..:.
Zfish   889 PSLHKVLPTREELRAQHSHPRRSSP-------QPSSQPILQLHQPKA-HPILQSSPHTSPQPPHT 945

  Fly  1480 IAGATEMANPKNSNRTGTGTGSVTSMSSSTITGELSSKVVASSSRRETGDTESDVAQLITDEISQ 1544
            .|..|.:.:|..|                                                 |.|
Zfish   946 SAQHTRLQHPSQS-------------------------------------------------IYQ 961

  Fly  1545 SQSEATDDSVGAMPNSSRSAGEGNPVITGSRLRHLDPPVSVSSLPNGHCSAGVGGGSPKPLPPPR 1609
            ||..       .:|.:|       |.:|..:..|..|  |..|. .|..|:.|....|.||||| 
Zfish   962 SQQT-------TVPRTS-------PSLTKQKSLHSQP--SQQSF-EGTLSSKVPPPPPPPLPPP- 1008

  Fly  1610 RTRVVAQMCQEPPRPKANQQVKAIVTITETARIMRSSPTKGSGSGSATGTGSVGGSP 1666
                    |..||.||.:.  ||......:.:.:|....:.|   ..|..|.:|..|
Zfish  1009 --------CDPPPLPKPSP--KASDNNHMSVKRLRWEQVENS---EGTIWGQLGDDP 1052

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PsGEFNP_996333.4 DUF4799 <99..209 CDD:318308
C2 286..>381 CDD:425499
PDZ_canonical 645..716 CDD:483948 20/63 (32%)
RhoGEF 835..1007 CDD:470622 48/227 (21%)
PRK12323 <2304..>2415 CDD:481241
grid2ipbXP_068080705.2 None
Blue background indicates that the domain is not in the aligned region.

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