DRSC/TRiP Functional Genomics Resources

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Protein Alignment PsGEF and CG5921

DIOPT Version :9

Sequence 1:NP_996333.4 Gene:PsGEF / 31224 FlyBaseID:FBgn0264598 Length:2777 Species:Drosophila melanogaster
Sequence 2:NP_727061.2 Gene:CG5921 / 31538 FlyBaseID:FBgn0029835 Length:886 Species:Drosophila melanogaster


Alignment Length:1112 Identity:217/1112 - (19%)
Similarity:342/1112 - (30%) Gaps:365/1112 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  1170 LVNAALGSTPLSSPLD-------SPDVLNTLVPLSDIGLTTASMGSMKLPSLDSIH-LKQQQKQQ 1226
            |.|:|  ||..||.:.       |.||: ||.       |||:.....:|:...:. |:..:..|
  Fly    17 LTNSA--STDCSSSMQGSTTSSASSDVM-TLT-------TTAASSWCAIPASSRLRVLRLVRPHQ 71

  Fly  1227 RTNNSHGHVHSATGVATDRTADRSHGH----NHGIHGGHVEQIELLIDEKCRILNKTGTPKSSAL 1287
            |.....|....:|...|.| ..|.||.    :|..|||......|.|.:  :||...|.....|:
  Fly    72 RRLLVGGPERGSTYGFTVR-GGREHGTGFFVSHVEHGGEAHLKGLRIGD--QILRINGFRLDDAV 133

  Fly  1288 HLANWMKGQLDKQQQQARLAAIARSQENVSAEDEQLIFNSDSEQDERITYWTRQQLEKRTKELNL 1352
            |                             .|..||:...|     |:|...|            
  Fly   134 H-----------------------------KEFIQLVAGQD-----RVTLKVR------------ 152

  Fly  1353 AKENGGLSARPNFGGKRLSGVEELSMSATSDIYSTSEAEGVTSVISQSHSTTSDSQITVRSSPIV 1417
                 |:...|    .|....|.||.|... :.|.|.....:|...:....:.|..:.:..:|..
  Fly   153 -----GVGMLP----VRDLPEERLSWSVVK-LPSVSGTPSESSFKGERRGASRDISVVLHVAPRT 207

  Fly  1418 LDKLAVCR----------HCHKNCQQSGPGGARPGGG-GGVNNSSSTPVLLCNSLKVQHSQSSPN 1471
            ...|.:|:          ...|:...:...|.|||.. ..||:...:.||...::.|..|.|..:
  Fly   208 KLGLGICKGPEWKPGIFVQFTKDRSVAREAGLRPGDQILSVNSIDFSDVLFSEAVAVMKSSSKLD 272

  Fly  1472 RCCKLSNGIAGATEMANPKNSNRTGTGTGSVTSMSSSTITGELSSKVVASSSRRETGDTESDVAQ 1536
            ...:.:.|.             ....|..|..:.|:|::||:.|.....:.|:|.|         
  Fly   273 MVVRTAAGC-------------DLFPGESSGYNSSASSVTGDQSPCWADAKSKRLT--------- 315

  Fly  1537 LITDEISQSQSEATDDSVGAMPNSSRSAGEGNPVITGSRLRHLDPPVSVSSLPNGHCSAGVGGGS 1601
                               |:...|.:.|.|               ..:||.|        |.||
  Fly   316 -------------------AVREESGAGGGG---------------CGLSSAP--------GAGS 338

  Fly  1602 PKPLPPPRRTRVVAQMCQEPPRPKANQQVKAIVTITETARIMRSSPTKGSGSGSATGTGSVGGSP 1666
            |.   ..:...|..||            .|.|:.:||....:.::....:|..|.:|:||.|.. 
  Fly   339 PN---WSQGVEVHKQM------------NKTIIKLTENGTSINNTYIASTGGSSVSGSGSTGSG- 387

  Fly  1667 AKYAACHCRCTPEDFTHAQLSPDKMEHQTCKLLESPKQTTTTLEQKQ-EDEQLSLMLIGLAQ-LA 1729
                      |......:|.:|           .:|.:.:||:::.. .....:...|||:. .|
  Fly   388 ----------TSGRSQQSQSNP-----------SNPSRNSTTMKRSHLRPVNSAGSGIGLSSGSA 431

  Fly  1730 PAATLCGQERIPKEENSTPTIAVVPPTPDSVLTKTSTHVWDNSGCSSNGGGTSTTSTATTTTKQP 1794
            .:|...|..............|..||.|..           |.|.:::|...|:.|:|.|...:.
  Fly   432 GSAGSAGSSGSGSRSGGVIAPAPAPPPPAM-----------NEGANASGSVGSSLSSAITEELKK 485

  Fly  1795 RQAIIENIPEDSCDESPLDEEPPYRPMSSALRRFGTMSSLEKLPSDDR-MDEADELDDDLDSFKP 1858
            |:            |....::...|                  .:.|| .|....:|..|     
  Fly   486 RK------------EKQQQQQHQQR------------------HNRDRDRDGNGNVDRQL----- 515

  Fly  1859 NGHDGNSPQNEEDDEDADSERALVQNDLGASSSSGVIVN--GEGLASGAWTNRAGAYVSDKMSFF 1921
            .||:||........:.:..:||.|.........|..|.|  |.|.|.||..:...|....     
  Fly   516 TGHNGNGGHRSSVGQVSHRQRANVAGVAATLQGSERISNLTGGGGAGGAGGSNGAAGAGG----- 575

  Fly  1922 EESRAFIDKYLGRWNAGDAQQQHQ---QGTASETDEQMDECTSGATSGEEVWGTPTS------GG 1977
            ::..|.:|::         ::.||   :....|::.::......:.:...::|...|      ||
  Fly   576 DQHTALMDEF---------KRAHQRMFRNGFHESEHKLSSLGKSSLADRSLYGREMSLLRVKNGG 631

  Fly  1978 DNDDQDLQLINSENTHSSPTKSSTSLNDDDDTELMMDELLMAPPMTASTIRGLLPRFYRRRLEPL 2042
            ..        ..|.:...||....|:.              .|.:|.||        |:.|.|.|
  Fly   632 SG--------GGEGSGVMPTMRPVSMG--------------RPLVTMST--------YQERGETL 666

  Fly  2043 FEEETESDEE--KTQQDSDD------IKKGEATTNGHYLEDSAG----SSSDSESVPPAPPLVPR 2095
            .......||.  :...:|::      .:....|.|.:.|:...|    :.:.|..:||.||....
  Fly   667 KRTSIMPDESCYRNSINSNNNNGFSRNRSNSNTNNNNRLQSQNGVNPANGNGSPELPPPPPQFAN 731

  Fly  2096 P---VVPDREEDP-------SAEGQQENLAMEDQEDLHSSVERL------LPNLATSAMGPRPLL 2144
            |   .:|.:...|       :..|....|.       :.|:.::      :.:.:.|..|.||  
  Fly   732 PQPKQMPPQHIKPMTGNAAANGSGSANGLG-------NGSLAKVRQPMSPMRSASISVGGFRP-- 787

  Fly  2145 TTRLLPTTAIDPQP--PAVLVASSCEYLLDQRPSSVPGRDLAGGS-------IGTTTM------- 2193
                 |.|   |||  .||.:.||      |...||.|||:|...       :||.|:       
  Fly   788 -----PAT---PQPDYDAVQIRSS------QGSESVSGRDVATSQQQRRTLRLGTVTIGEYGDQR 838

  Fly  2194 -TSSRPT 2199
             |..|.|
  Fly   839 TTGKRET 845

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PsGEFNP_996333.4 DUF4799 <102..209 CDD:292674
C2 286..>381 CDD:278593
PDZ_signaling 644..716 CDD:238492
RhoGEF 831..1000 CDD:295373
CG5921NP_727061.2 PDZ_signaling 82..152 CDD:238492 23/106 (22%)
PDZ_signaling 197..276 CDD:238492 15/78 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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