DRSC/TRiP Functional Genomics Resources

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Protein Alignment PsGEF and Arhgef10

DIOPT Version :10

Sequence 1:NP_996333.4 Gene:PsGEF / 31224 FlyBaseID:FBgn0264598 Length:2777 Species:Drosophila melanogaster
Sequence 2:NP_001413962.1 Gene:Arhgef10 / 306618 RGDID:1565043 Length:1373 Species:Rattus norvegicus


Alignment Length:1682 Identity:305/1682 - (18%)
Similarity:523/1682 - (31%) Gaps:610/1682 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   406 AERLAKLENAGNEAKRSEFLGCSTFPLNELVHPDSGVSAGSYKLHAQACPPPTSRHSQPKANA-G 469
            ||...|.:.:.||.:            .||...:||.........|     ||:......|.| |
  Rat    12 AEHEVKCDTSNNEEE------------GELFDFESGDEVPEADRQA-----PTADDGTGVAEADG 59

  Fly   470 QDQK--------QETEAAKDQDKQQDDSPAEMA--AAVTVTPQKPVATGSGSGSNSAAMALNDE- 523
            .|:.        .|.:.| |::...|.:..:.|  |....:|     .|:|:|:.|...|..:: 
  Rat    60 ADENTSPDGTGVAEADGA-DENTSPDGTRVDEADGADENTSP-----AGNGTGAESVPEAEPEKL 118

  Fly   524 VISISIDSMGKED--PLLPQQPQQPMKLSKKALHQRDA---DENLFLRF---------------- 567
            |:.|.::.....|  |....||..|           ||   :|.:.||.                
  Rat   119 VVPIKVNPYSVIDITPFQEDQPPSP-----------DANPEEEGVGLRVPSGYCVPVPCGYAVPS 172

  Fly   568 -LELDPPADGNANSTTTQAQATGSQSSASKANESNANHLNNGTSGGRRQSTMPNSG--GSSVGGA 629
             |.|..|.  .::....:||:...:.:|..|.:...|.|::        ..:|:||  ||..|.|
  Rat   173 NLPLLLPT--YSSQIIIRAQSVEEEVAAEVAGDGQCNSLSS--------EDLPHSGDQGSQEGSA 227

  Fly   630 VRQQQGRTPFTMTKRLTRTEERGFGFSIVWTHPPR----VEKIEAGLSADRCGILPGDYVIFVDK 690
            :.:                          |...|.    :|..|..:..|            |.:
  Rat   228 LAR--------------------------WAADPANTAWMENPEEAIYDD------------VPR 254

  Fly   691 HNVVTMPEADVLNLIRSQG-----------SSLTLEIFRR--SGAGATTITSTDLGQNN----VH 738
            .|..:.|:..:.:.:.:.|           ||...|.:..  ...|...|..:.|..|:    .|
  Rat   255 ENSDSEPDEMIYDDVENGGEGGNSSLEYGWSSSEFESYEEPSDSEGKNGIPRSFLRSNHKKQLSH 319

  Fly   739 ISTRLGAAVGLGSEEHTLATTATGTTTVMSLQRTTSTRIQPLANSMSRPATACSGTTSSIEAAKR 803
            ..||..|..     |..:......|...|..|:....::|.|..:      |..||...:|..|.
  Rat   320 DLTRFKAHC-----EEKMRGLVASTVGAMEAQQRQEWKMQRLMKA------AKEGTRDGLEKTKA 373

  Fly   804 RLHLPQVTFSKESIVPVTDNR-----------------------------------RRFLL-QLI 832
            .:...:.....:|:|. .|:|                                   ||::| .::
  Rat   374 AVKRGRSFIRTKSLVS-QDHRYYFEEEQNLFIDVDCKHPEAVLTPMPEGLSQQQVVRRYILGSIV 437

  Fly   833 SREQNFTAALHFGVDRFVQPLGERKD-LISPNDHRTLFQNIDELLRIAEDILEQLCSSDQQDQEP 896
            ..|:|:..||...::::.:||.|.:. |:|....|.:|..|.|:|:...  :.|:..:.:..:..
  Rat   438 ESEKNYVDALRRILEQYEKPLSEMEPRLLSDRKLRMVFYRIKEILQCHS--MFQIALASRVSEWD 500

  Fly   897 QMNFASRVYLS--KTTAICAAYKKYCNGIKRADCVLVNKSRQTGSEFIAF--ITEPAVPRKRPDL 957
            .:.....|:::  ..:.:..||.:|.|....|..|| .|:..|...|:.|  :::.:.| .|..|
  Rat   501 AVETIGDVFVASFSKSMVLDAYSEYVNNFSTAVAVL-KKTCATKPAFLEFLKLSQDSSP-DRVTL 563

  Fly   958 TMFIHRPLQHFREILKLMQLLAGNCHVDTEEHKNFSTVINELQAAYREITVSSGLMEPLGEGRPL 1022
            ...:.||:|.|.:.:.|:|.:..|......:.......:.||:.          |.|.|.|.:  
  Rat   564 HSLMMRPIQRFPQFILLLQDMLKNTAKGHPDRLPLQMALTELET----------LAEKLNERK-- 616

  Fly  1023 LTLQDLESRMVFTKCKPFTLAV----------QGRQWIFGGD-----LSRVEGRSVKPYWTLLF- 1071
               :|.:.|   .:.|....|:          .|.:::...|     :....|..||.....:| 
  Rat   617 ---RDADQR---CEIKQIAKAINERYLNKLLSSGNRYLVRSDDVIETVYNDRGEIVKTKQRRIFM 675

  Fly  1072 -SDIIVFAKVS-----------RDRVLFITEEPIPIANVVD------SCFHMRKKTTEFRLTVDP 1118
             :|:::.|..|           ..|.|.....|:...:|::      :..|.|..|         
  Rat   676 LNDVLMCATASSRNSHESHAMMNQRYLLKWSVPLGQVDVIEYSGSSGTGDHSRHHT--------- 731

  Fly  1119 NGRLAESPTGYCAPDLTRTPKRGARRKSLILRAPSLELKAVWQNLLQRQIFLVNAALGSTPLSSP 1183
                |.||                            |..||..|:...::::....|        
  Rat   732 ----AHSP----------------------------ESLAVVANVKPHKVYMGPGQL-------- 756

  Fly  1184 LDSPDVLNTLVPLSDIGLTTASMGSMKLPSLDSIHLKQQQKQQRTNNSHGHVHSATGVATDRTAD 1248
              ..|:.|.|..|:.:|..:..:|:::            ...|..|.|..|             |
  Rat   757 --YQDLQNLLHDLNVVGQISQLIGNLR------------GSYQNLNQSVAH-------------D 794

  Fly  1249 RSHGHNHGIHGGHVEQIELLID------EKCRI-------LNKTGTPKSSALHLANWMKGQLDKQ 1300
            .:.|         ::|:.|..:      ::|||       .:|:|.|.........:.....:..
  Rat   795 WTSG---------LQQLILRKEDAIRAADRCRIQLQLPGKQDKSGRPTFFTAVFNTFTPAIKESW 850

  Fly  1301 QQQARLAAIARSQEN----VSAEDEQLIFNSDSEQDERITYWTRQQLEKRTKELNLAKENGGLSA 1361
            ....::|.:|..:||    ...:|:..:                  .:|.|..|.:...:..::.
  Rat   851 VSSLQMAKLALEEENHMGWFCVDDDGSL------------------AKKETHPLLVGHTSVMVAK 897

  Fly  1362 RPNFGGKRLSGVEELSMSA-------TSD--------------IYSTSEAEGVTSVIS------- 1398
            :|.|         ::..:|       ::|              |.|.|...|..:::|       
  Rat   898 QPEF---------KIECAAYNPEPYPSNDNQPASPSTARGFLWIGSCSNQMGQVAIVSFQSANPK 953

  Fly  1399 ------------------------QSHSTTSDSQITVRSSPIVLDKLAVCRHCHKNCQQSGPGGA 1439
                                    |..:.|.|.:.|...:|          |....|..:..|..
  Rat   954 VIECFNVESRILCMIYIPAEESKPQEPADTKDPEATASRAP----------HVPTICLGTEEGSI 1008

  Fly  1440 RPGGGGGVNNSSSTPVLLCNSLKVQHSQSSPNRCCKLS-----NGI-AGATEMANPKNSNRTGTG 1498
                  .:..||..    |..:::||.. :|::...:|     :|: ||   :.|...::.|...
  Rat  1009 ------SIYKSSQG----CKKVRLQHFY-TPDKSTVMSLACSPHGLYAG---LVNGSVASYTKAP 1059

  Fly  1499 TGSVTSMSSSTI-TGEL--SSKVVASSSRRETGDTESDVAQLITDEISQSQSEATDDSVGAMPNS 1560
            .||..|.....| .|.|  .|.::...:.......:..:|.:.|..: ::|.||..|. |.:.:.
  Rat  1060 DGSWNSEPQQVIKLGVLPVRSLLLVEGALWAASGGQVFMASVETHTV-ENQLEAHQDE-GMVISH 1122

  Fly  1561 SRSAGEGNPV--ITGSRLR-------------HLDPPV----------SVSSL--PNGHCSAGVG 1598
            ...||.|..:  .:||.||             ::|.||          ||:||  .:|....|..
  Rat  1123 MAVAGVGIWIAFTSGSTLRLFHTETLKHLQDVNIDAPVHSMLPGHQRLSVTSLLVCHGLLMVGTS 1187

  Fly  1599 GGSPKPLPPPRRTRVVAQMCQEPPRPKANQQVKAIVTITETARIMRSSPTKGSGSGSATGTGSVG 1663
            .|....||.||...:          ||                              .||.|.|.
  Rat  1188 LGVVVALPVPRLQGI----------PK------------------------------VTGRGMVS 1212

  Fly  1664 ----GSPAKYAACHCRCTPEDFTHAQLSPDKMEHQTCKLLESPKQTTTTLEQKQEDEQLSLMLIG 1724
                ..|.|:..     |...|.:...:.|:           |:.::   |.:.||         
  Rat  1213 YHAHNGPVKFIV-----TATAFQNKDRARDR-----------PRSSS---ELQDED--------- 1249

  Fly  1725 LAQLAPAATLCGQERIPKEENSTPTIAVVPPTPDSVLTKTSTHVW--DNSG------CSSNGGGT 1781
                 |...|||:|       .|..:.         .|.|||.||  |:.|      .||:.|..
  Rat  1250 -----PKDLLCGEE-------GTSCLG---------QTDTSTAVWLGDSLGLTAQNDLSSSSGSL 1293

  Fly  1782 STTSTATTTTKQPRQAIIENIPEDS--CDESPLDEEPPYRPMSSA--LRRFGTMSSL 1834
            |..|::           :|:...||  ||   |..:|...|.|.|  .||....|:|
  Rat  1294 SHGSSS-----------LEHRSVDSSLCD---LLRDPSAFPRSRAQSSRRARASSAL 1336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PsGEFNP_996333.4 DUF4799 <99..209 CDD:318308
C2 286..>381 CDD:425499
PDZ_canonical 645..716 CDD:483948 11/85 (13%)
RhoGEF 835..1007 CDD:470622 39/176 (22%)
PRK12323 <2304..>2415 CDD:481241
Arhgef10NP_001413962.1 PHA03169 <2..>114 CDD:223003 27/124 (22%)
RhoGEF 429..613 CDD:238091 44/197 (22%)
PH_19 636..785 CDD:465965 30/211 (14%)
WD40_2 893..1371 CDD:465964 112/582 (19%)
Blue background indicates that the domain is not in the aligned region.

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