DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PsGEF and Grid2ip

DIOPT Version :10

Sequence 1:NP_996333.4 Gene:PsGEF / 31224 FlyBaseID:FBgn0264598 Length:2777 Species:Drosophila melanogaster
Sequence 2:NP_001152793.1 Gene:Grid2ip / 170935 MGIID:2176213 Length:1203 Species:Mus musculus


Alignment Length:1506 Identity:274/1506 - (18%)
Similarity:446/1506 - (29%) Gaps:582/1506 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   653 FGFSIVWTHPPRVEKIEAGLSADRCGILPGDYVIFVDKHNVVTMPEADVLNLIRSQGSSLTLEIF 717
            |||.:..:.|..|.::..|.||...|:.|||.::.|:...|..:....::.|.|.          
Mouse    12 FGFQLGGSGPCFVIEVAEGSSAHAGGLRPGDQILEVEGLAVGGLSRERIVRLARR---------- 66

  Fly   718 RRSGAGATTITSTDLGQNNVHISTRLGAAVGL--GSEEHTLATTATGTTTVMSLQRTTSTRIQPL 780
                                  ..|:..::|:  |.|....|.||...|....       |..||
Mouse    67 ----------------------CPRVPPSLGVLPGPEGGPTALTAAWLTRRFG-------RSLPL 102

  Fly   781 ANSMSRPATACSGTTSSIEAAKRRLHLPQVTFSKESIVPVTDNRRRFLLQLISREQNFTAALHFG 845
            :..:.|.|   .|........:||....:.:...:.|:..         :|.::||.|||...|.
Mouse   103 SRELLRLA---GGPRPDAVHRERRRKAQEFSCQVDDILGD---------RLTAKEQVFTALKQFA 155

  Fly   846 VDRFVQ----------------PLGERKDLISPNDHRTLFQNIDELLRIAEDILEQLCSSDQQDQ 894
            .::.|.                |:.:...:..|..||..|..:     :::.:|.:||.:.:...
Mouse   156 AEQRVDELVWTLTLVLPSEAQGPVLDNLRIFIPKKHRARFDEV-----VSQGLLGKLCRARRAQG 215

  Fly   895 EPQMNFASRVYLSKTTAICAAYKKYCNGIKRADCVLVNKSRQTGSEFIAFITEPAVPRKRPDLTM 959
                  |.|:..|::.             :|.:.:||:             |..:...:|||   
Mouse   216 ------AQRLRRSRSE-------------ERPERLLVS-------------TRASAAPRRPD--- 245

  Fly   960 FIHRPLQHFREILKLMQLLAGNCHVDTEEHKNFSTVINELQAAYREITVSSGLMEPLGEGRPLLT 1024
               .|...     |...||.|.                                  .|.|.|..|
Mouse   246 ---EPPPR-----KATSLLGGR----------------------------------TGPGGPRRT 268

  Fly  1025 LQDLESRMVFTKCKPFTLAVQGRQWI---FGGDLSRVEGRSVKPYWTLLFSDIIVFAKVSRDRVL 1086
            ::..:....|    .|||...|..||   ..|  |..|..|:|                |.||:|
Mouse   269 VRVYKGNKSF----GFTLRGHGPVWIESVLPG--SPAENASLK----------------SGDRIL 311

  Fly  1087 FITEEPIPIANVVDSCFHMRKKTTEFRLTVDPNGRLAESPTGYCAPDLTRTPKRGARRKSLILRA 1151
            |:        |.:|    ||.                      |:.|...:..:|:.      ..
Mouse   312 FL--------NGLD----MRN----------------------CSHDKVVSMLQGSG------AM 336

  Fly  1152 PSLELKAVWQNLLQRQIFLVNAALGSTPLSS---PLDSP---DVLNTLVPLSDIGLTTASMGSMK 1210
            |:|.::.                 |..|.:|   .||||   ..|.:|..::||           
Mouse   337 PTLVVEE-----------------GPVPFASDSDSLDSPTRASALTSLQWVADI----------- 373

  Fly  1211 LPSLDSIHLKQQQKQQRTNNSHGHVHSAT-----GVATDRTADRSHGHNHGIHGGHVEQIELLID 1270
            |||  ||.::.:...|:.:      |..|     ||.  |..:|...|.:         |:.||.
Mouse   374 LPS--SIRVQGRTFSQQLD------HLLTPPERYGVC--RALERFFQHRN---------IDTLIV 419

  Fly  1271 EKCRILNKTGTPKSSAL-----HLANWMKGQLDKQQQQARL--AAIARSQENVSAEDEQLIFNSD 1328
            :...:|:   ||....|     .|..:.:.:|.:::....|  .|:...:.::..|.|.....:.
Mouse   420 DVYPVLD---TPAKQVLWQFLYQLLTYEEQELCQEKIACFLGYTAMTEPESSLDLEPESTPEPTP 481

  Fly  1329 SEQDE---RITYWTRQQLEKRTKELNLAKENGGLSAR--PNFGGKRLSGVEELSMSAT------S 1382
            ..|..   |.:...|:.|..:..|.:|:...|.....  |...|:|.:| :..|:..|      |
Mouse   482 EPQPRSSLRASSMCRRSLRSQGLETSLSCGPGDCPEMPLPLIPGERQAG-DGTSLPETPNPKMMS 545

  Fly  1383 DIYSTSEA------EGVTSVISQSHSTTSDSQITVRSSPIVL-------DKLAVCRHCHKNCQQS 1434
            .:|:..|:      :|....:|:|.::.....:...|.|..|       |:|.........|.  
Mouse   546 AVYAELESRLNSSFKGKIGTMSKSRASPPVPSLVGTSGPRTLSGVSWPSDRLLPSPCYDPLCS-- 608

  Fly  1435 GPGGARPGGGGGVNNSSSTPVLLCNSLKVQ---------HSQSSPNRCCKLSNGIAGATEMANPK 1490
                   ||....::|.|.|....:|.:..         |:.|.|            :.:...|.
Mouse   609 -------GGLASPSSSESHPYASLDSSRAPSPQPGLGSIHADSPP------------SPDPIRPP 654

  Fly  1491 NSNRTGTGTGSVTSMSSSTITGELSSKVVASSSRRETGDTESDVAQLITDEISQSQSEATDDSVG 1555
            :..:....:..|.|..:......||.::         |...|.|...:|.|....:....||...
Mouse   655 SRRKLFAFSRPVRSRDTDRFLDALSEQL---------GPRLSIVDDFLTPENDYEEMSFHDDQGS 710

  Fly  1556 AMPNSSRSAG-------EGNPVITGSRLRHLDPPVSV----------SSLPNGHCSAGVGG---- 1599
            .:.|...||.       ||:.:...|...|:.||...          ...|:...|.|..|    
Mouse   711 FVTNERSSASECVSSSEEGSSLTYSSISDHIPPPPLSPPPPPPLPFHDPKPSSRTSDGPRGPPQS 775

  Fly  1600 --------------GSPKPLPPP--------------RRTRV----------------------- 1613
                          ..|.|||||              ||:..                       
Mouse   776 LTKPLTQINHPVPPPPPPPLPPPVPCAPPMLSRGVGHRRSETSHMSVKRLRWEQVENSEGTIWGQ 840

  Fly  1614 ---------VAQM-----------CQEPPRPKANQQ---VKAIVTITETARIMRSSPTKGSGSGS 1655
                     ::.|           .|:||:|....:   .|.:|.|....:...:|         
Mouse   841 LGEDSDYDKLSDMVKYLDLELHFGTQKPPKPVPGPEPFRKKEVVEILSHKKAYNTS--------- 896

  Fly  1656 ATGTGSVGGSPAKYAACHCRCTPEDFTH---------------AQL---SPDKMEHQ-------- 1694
                         ....|.:.||.:...               |||   :||..|.|        
Mouse   897 -------------ILLAHLKLTPGELRQVLMSMEPRRLEPAHLAQLLLFAPDADEEQRYQAFREA 948

  Fly  1695 ----------TCKLLESPKQTT--------TTLEQKQED--------EQLSLMLIGLAQLAPAAT 1733
                      ..::|..|:..|        .||::|.|:        .|.||.|....:||....
Mouse   949 PGRLSEPDQFVLQMLSVPEYKTRLRSLHFQATLQEKTEEIRGSLECLRQASLELKNSRKLAKILE 1013

  Fly  1734 LC---------GQERIPK----------EENSTPTIAVVPPTPDS------VLTKT-STHVWDNS 1772
            ..         ||.:..|          |.|||.|:       |.      :|.|: |.|..:..
Mouse  1014 FVLAMGNYLNDGQPKTNKTTGFKINFLTELNSTKTV-------DGKSTFLHILAKSLSQHFPELL 1071

  Fly  1773 GCSSNGGGTSTTSTATTTTKQPRQAIIENIPE--DSCDE--------SPLDEEPPYRPMSSALRR 1827
            |.:.:      ..|.....|..::|:..::.:  |:..|        :|..|:.....|:|.|..
Mouse  1072 GFAQD------LPTVPLAAKVNQRALTGDLADLHDTVSEIQVACQSMAPSSEDRFAVVMASFLET 1130

  Fly  1828 FGTMSSLEKLPSDDRMDEADELDDDLDSFKPNGHDGNSPQNEE-----DDEDADSERALVQNDLG 1887
              ...:|..|....| :..:||...|..|   |.|..:..:|.     .:..:..||||  :||.
Mouse  1131 --AQPALRALDGLQR-EAMEELGKALAFF---GEDSKATTSEAFFGIFSEFMSKFERAL--SDLQ 1187

  Fly  1888 ASS---SSGVI 1895
            |..   |||::
Mouse  1188 AGDGPRSSGMV 1198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PsGEFNP_996333.4 DUF4799 <99..209 CDD:318308
C2 286..>381 CDD:425499
PDZ_canonical 645..716 CDD:483948 16/62 (26%)
RhoGEF 835..1007 CDD:470622 30/187 (16%)
PRK12323 <2304..>2415 CDD:481241
Grid2ipNP_001152793.1 PDZ1_L-delphilin-like 2..77 CDD:467225 18/96 (19%)
HN_L-delphilin-R1_like 122..201 CDD:259820 16/92 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 215..270 19/131 (15%)
PDZ2_L-delphilin-like 269..342 CDD:467226 26/134 (19%)
HN_L-delphilin-R2_like 378..457 CDD:259821 18/98 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 466..541 15/75 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 563..586 4/22 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 611..656 8/56 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 710..821 21/110 (19%)
FH2 812..1180 CDD:396655 68/408 (17%)
Blue background indicates that the domain is not in the aligned region.

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