DRSC/TRiP Functional Genomics Resources

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Protein Alignment Raf and AT5G58950

DIOPT Version :9

Sequence 1:NP_001096867.3 Gene:Raf / 31221 FlyBaseID:FBgn0003079 Length:739 Species:Drosophila melanogaster
Sequence 2:NP_568893.1 Gene:AT5G58950 / 836012 AraportID:AT5G58950 Length:525 Species:Arabidopsis thaliana


Alignment Length:458 Identity:128/458 - (27%)
Similarity:209/458 - (45%) Gaps:71/458 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   309 RRCSSSGSSSSSKPPSSSSGNHRQGRPPRISQDD----RSNSAPNVCINNIRSVTSEVQRS---L 366
            :|.|||.|:|||.|...||.:...|....:...|    .|....|...:..|||:...|.:   :
plant    47 QRSSSSSSASSSDPKLVSSNSQTTGDTSSLEAADVYVVDSEIQTNPVTHKQRSVSPSPQMAVPDV 111

  Fly   367 IMQARP-----PLPH-----------PCTDHSNS------TQASPTSTLK-----HNRPRARSAD 404
            ..:||.     ..||           |...|.||      ...||:..::     ..:.|.:|..
plant   112 FKEARSERKRFSTPHPRRVESEKGMKPKLSHKNSFDKRSFNLRSPSGPIRDLGTLRIQERVKSKK 176

  Fly   405 ESNKNLLLRD------AKSSEENWNILAEEILIGPRIGSGSFGTVYRAHWHG-----PVAVKTLN 458
            ::..:.|..:      |..:.|.:.:...::..|.:...|.:..:|    ||     .||||.:.
plant   177 DTGWSKLFDNTGRRVSAVEASEEFRVDMSKLFFGLKFAHGLYSRLY----HGKYEDKAVAVKLIT 237

  Fly   459 VKTPSP-----AQLQ-AFKNEVAMLKKTRHCNILLFMGCVSKPSL-AIVTQWCEGSSLYKHVHVS 516
            |.....     |:|: .|..||.:|.:..|.|::.|:|....|.: .::||:....||...:|..
plant   238 VPDDDDNGCLGARLEKQFTKEVTLLSRLTHPNVIKFVGAYKDPPVYCVLTQYLPEGSLRSFLHKP 302

  Fly   517 ETK-FKLNTLIDIGRQVAQGMDYLHAKNIIHRDLKSNNIFLHEDLSVKIGDFGLATAKTRWSGEK 580
            |.: ..|..||:....:|:||:|:|::.|||||||..|:.:.|:..:||.|||:|..:...  :.
plant   303 ENRSLPLKKLIEFAIDIARGMEYIHSRRIIHRDLKPENVLIDEEFHLKIADFGIACEEEYC--DM 365

  Fly   581 QANQPTGSILWMAPEVIRMQELNPYSFQSDVYAFGIVMYELLAECLPYGHISNKDQILFMVGRGL 645
            .|:.| |:..|||||:|:.:   |:..::|||:||:|::|::|..:||..: |..|..|.|....
plant   366 LADDP-GTYRWMAPEMIKRK---PHGRKADVYSFGLVLWEMVAGAIPYEDM-NPIQAAFAVVHKN 425

  Fly   646 LRPDMSQVRSDAPQALKRLAEDCIKYTPKDRPLFRPLLNMLENMLRTLPKIHRSASEPNLTQSQL 710
            :||   .:..|.|.|:|.|.|.|....|..||.|..::.:||....:|.:    ....||:.|::
plant   426 IRP---AIPGDCPVAMKALIEQCWSVAPDKRPEFWQIVKVLEQFAISLER----EGNLNLSSSKI 483

  Fly   711 QND 713
            ..|
plant   484 CKD 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RafNP_001096867.3 RBD_RAF 142..212 CDD:340514
C1_Raf 221..269 CDD:410361
STKc_Raf 435..687 CDD:270964 86/264 (33%)
AT5G58950NP_568893.1 STKc_MAP3K-like 214..463 CDD:270901 86/262 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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