DRSC/TRiP Functional Genomics Resources

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Protein Alignment Raf and AT5G50000

DIOPT Version :9

Sequence 1:NP_001096867.3 Gene:Raf / 31221 FlyBaseID:FBgn0003079 Length:739 Species:Drosophila melanogaster
Sequence 2:NP_199811.1 Gene:AT5G50000 / 835064 AraportID:AT5G50000 Length:385 Species:Arabidopsis thaliana


Alignment Length:379 Identity:96/379 - (25%)
Similarity:168/379 - (44%) Gaps:77/379 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   354 NIRSVTSEVQRSLIMQARPPLPHPCTDHSNSTQASPTSTLKHNRPRARSADESNKNLLLRDAKSS 418
            :::|:..:::|.|                     |...||:.|:.:    ||.:...:.....:|
plant    15 DLKSLDEQLERHL---------------------SRALTLEKNKKK----DEEDTTAVAIGGSAS 54

  Fly   419 EE-----------------NWNILAEEILIGPRIGSGSFGTVYRAHWHG-PVAVKTLNVKTP--- 462
            ..                 .|.|...:::|...:..|:||||:|..:.| .||||.|:....   
plant    55 SSPVTLNGGGFVGKRKQRLEWEIDPSKLIIKTVLARGTFGTVHRGIYDGQDVAVKLLDWGEEGHR 119

  Fly   463 SPAQLQA----FKNEVAMLKKTRHCNILLFMGCVSKPS-----------------LAIVTQWCEG 506
            |.|::.:    |..|||:..|..|.|:..|:|.....|                 ..:|.::..|
plant   120 SEAEIVSLRADFAQEVAVWHKLDHPNVTKFIGATMGASGLQLQTESGPLAMPNNICCVVVEYLPG 184

  Fly   507 SSLYKH-VHVSETKFKLNTLIDIGRQVAQGMDYLHAKNIIHRDLKSNNIFLHEDLSVKIGDFGLA 570
            .:|..: :.....|.....::.:...:|:|:.|||::.|:|||:|:.|:.|.:..:|||.|||:|
plant   185 GALKSYLIKNRRRKLTFKIVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKTRTVKIADFGVA 249

  Fly   571 TAKTRWSGEKQANQPTGSILWMAPEVIRMQELNPYSFQSDVYAFGIVMYELLAECLPYGHISNKD 635
            ..:.  |........||::.:|||||:..   |||:.:.|||:|||.::|:....:||..:: ..
plant   250 RVEA--SNPNDMTGETGTLGYMAPEVLNG---NPYNRKCDVYSFGICLWEIYCCDMPYPDLT-FS 308

  Fly   636 QILFMVGRGLLRPDMSQVRSDAPQALKRLAEDCIKYTPKDRPLFRPLLNMLENM 689
            ::...|.|..||||:.:.   .|.||..:.:.|....|..||....::.|||::
plant   309 EVTSAVVRQNLRPDIPRC---CPSALAAVMKRCWDANPDKRPEMDEVVPMLESI 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RafNP_001096867.3 RBD_RAF 142..212 CDD:340514
C1_Raf 221..269 CDD:410361
STKc_Raf 435..687 CDD:270964 81/277 (29%)
AT5G50000NP_199811.1 STKc_MAP3K-like 88..356 CDD:270901 80/276 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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